Experiment: Deoxyribonucleic from herring sperm 5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06345 and PS417_06350 overlap by 13 nucleotides PS417_06350 and PS417_06355 overlap by 1 nucleotides PS417_06355 and PS417_06360 are separated by 209 nucleotides
PS417_06345: PS417_06345 - pseudouridine synthase, at 1,408,590 to 1,409,648
_06345
PS417_06350: PS417_06350 - stationary phase survival protein SurE, at 1,409,636 to 1,410,385
_06350
PS417_06355: PS417_06355 - protein-L-isoaspartate O-methyltransferase, at 1,410,385 to 1,411,062
_06355
PS417_06360: PS417_06360 - peptigoglycan-binding protein LysM, at 1,411,272 to 1,412,108
_06360
Position (kb)
1409
1410
1411 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1408.815 kb on + strand, within PS417_06345 at 1408.815 kb on + strand, within PS417_06345 at 1408.816 kb on - strand, within PS417_06345 at 1408.816 kb on - strand, within PS417_06345 at 1409.070 kb on + strand, within PS417_06345 at 1409.070 kb on + strand, within PS417_06345 at 1409.070 kb on + strand, within PS417_06345 at 1409.071 kb on - strand, within PS417_06345 at 1409.641 kb on + strand at 1409.693 kb on + strand at 1409.693 kb on + strand at 1409.694 kb on - strand at 1409.711 kb on + strand, within PS417_06350 at 1409.940 kb on - strand, within PS417_06350 at 1410.045 kb on - strand, within PS417_06350 at 1410.115 kb on + strand, within PS417_06350 at 1410.299 kb on + strand, within PS417_06350 at 1410.299 kb on + strand, within PS417_06350 at 1410.299 kb on + strand, within PS417_06350 at 1410.299 kb on + strand, within PS417_06350 at 1410.299 kb on + strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.300 kb on - strand, within PS417_06350 at 1410.310 kb on + strand, within PS417_06350 at 1410.613 kb on + strand, within PS417_06355 at 1410.613 kb on + strand, within PS417_06355 at 1410.638 kb on + strand, within PS417_06355 at 1410.639 kb on - strand at 1411.013 kb on + strand at 1411.179 kb on - strand at 1411.205 kb on + strand at 1411.205 kb on + strand at 1411.207 kb on + strand at 1411.218 kb on + strand at 1411.298 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 5 mg/mL (C) remove 1,408,815 + PS417_06345 0.21 +0.3 1,408,815 + PS417_06345 0.21 -1.1 1,408,816 - PS417_06345 0.21 -0.3 1,408,816 - PS417_06345 0.21 -0.2 1,409,070 + PS417_06345 0.45 +0.0 1,409,070 + PS417_06345 0.45 -0.5 1,409,070 + PS417_06345 0.45 +0.4 1,409,071 - PS417_06345 0.45 +0.2 1,409,641 + +0.1 1,409,693 + -0.5 1,409,693 + -0.3 1,409,694 - -1.2 1,409,711 + PS417_06350 0.10 +0.8 1,409,940 - PS417_06350 0.41 +1.3 1,410,045 - PS417_06350 0.55 -0.2 1,410,115 + PS417_06350 0.64 -1.2 1,410,299 + PS417_06350 0.88 -1.9 1,410,299 + PS417_06350 0.88 -1.0 1,410,299 + PS417_06350 0.88 -0.2 1,410,299 + PS417_06350 0.88 -0.2 1,410,299 + PS417_06350 0.88 +0.6 1,410,300 - PS417_06350 0.89 -1.3 1,410,300 - PS417_06350 0.89 -1.2 1,410,300 - PS417_06350 0.89 +0.8 1,410,300 - PS417_06350 0.89 -2.2 1,410,300 - PS417_06350 0.89 +1.8 1,410,300 - PS417_06350 0.89 +0.6 1,410,300 - PS417_06350 0.89 +0.3 1,410,310 + PS417_06350 0.90 -0.1 1,410,613 + PS417_06355 0.34 -0.1 1,410,613 + PS417_06355 0.34 -0.1 1,410,638 + PS417_06355 0.37 +0.2 1,410,639 - -0.2 1,411,013 + -0.1 1,411,179 - +0.1 1,411,205 + -0.9 1,411,205 + -0.2 1,411,207 + +2.1 1,411,218 + -0.5 1,411,298 + +0.1
Or see this region's nucleotide sequence