Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03300 and PS417_03305 are separated by 120 nucleotides PS417_03305 and PS417_03310 are separated by 139 nucleotides PS417_03310 and PS417_03315 overlap by 4 nucleotides PS417_03315 and PS417_03320 are separated by 143 nucleotides
PS417_03300: PS417_03300 - alanine acetyltransferase, at 757,121 to 757,573
_03300
PS417_03305: PS417_03305 - HPr, at 757,694 to 758,098
_03305
PS417_03310: PS417_03310 - carbonate dehydratase, at 758,238 to 758,882
_03310
PS417_03315: PS417_03315 - hypothetical protein, at 758,879 to 759,406
_03315
PS417_03320: PS417_03320 - hypothetical protein, at 759,550 to 760,719
_03320
Position (kb) 758
759 Strain fitness (log2 ratio) -2
-1
0
1
2 at 757.245 kb on - strand, within PS417_03300 at 757.338 kb on + strand, within PS417_03300 at 757.469 kb on + strand, within PS417_03300 at 757.470 kb on - strand, within PS417_03300 at 757.512 kb on - strand, within PS417_03300 at 757.512 kb on - strand, within PS417_03300 at 757.515 kb on - strand, within PS417_03300 at 758.123 kb on + strand at 758.125 kb on + strand at 758.125 kb on + strand at 758.125 kb on + strand at 758.126 kb on - strand at 758.126 kb on - strand at 758.126 kb on - strand at 758.248 kb on + strand at 758.248 kb on + strand at 758.347 kb on - strand, within PS417_03310 at 758.347 kb on - strand, within PS417_03310 at 758.532 kb on + strand, within PS417_03310 at 758.617 kb on - strand, within PS417_03310 at 758.619 kb on + strand, within PS417_03310 at 758.781 kb on + strand, within PS417_03310 at 758.782 kb on - strand, within PS417_03310 at 758.782 kb on - strand, within PS417_03310 at 758.880 kb on + strand at 759.150 kb on + strand, within PS417_03315 at 759.208 kb on - strand, within PS417_03315 at 759.230 kb on + strand, within PS417_03315 at 759.230 kb on + strand, within PS417_03315 at 759.231 kb on - strand, within PS417_03315 at 759.231 kb on - strand, within PS417_03315 at 759.291 kb on - strand, within PS417_03315 at 759.291 kb on - strand, within PS417_03315 at 759.291 kb on - strand, within PS417_03315 at 759.291 kb on - strand, within PS417_03315 at 759.379 kb on + strand at 759.380 kb on - strand at 759.406 kb on + strand at 759.406 kb on + strand at 759.407 kb on - strand at 759.420 kb on + strand at 759.421 kb on - strand at 759.452 kb on - strand at 759.509 kb on + strand at 759.678 kb on - strand, within PS417_03320 at 759.858 kb on - strand, within PS417_03320 at 759.858 kb on - strand, within PS417_03320 at 759.879 kb on - strand, within PS417_03320
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 757,245 - PS417_03300 0.27 -1.1 757,338 + PS417_03300 0.48 -0.9 757,469 + PS417_03300 0.77 -0.7 757,470 - PS417_03300 0.77 +0.0 757,512 - PS417_03300 0.86 -0.7 757,512 - PS417_03300 0.86 -0.5 757,515 - PS417_03300 0.87 +0.7 758,123 + -2.1 758,125 + +0.1 758,125 + +1.5 758,125 + +0.3 758,126 - -0.4 758,126 - +1.1 758,126 - -0.4 758,248 + +1.1 758,248 + -1.8 758,347 - PS417_03310 0.17 +1.1 758,347 - PS417_03310 0.17 -0.0 758,532 + PS417_03310 0.46 +0.5 758,617 - PS417_03310 0.59 +1.9 758,619 + PS417_03310 0.59 +0.4 758,781 + PS417_03310 0.84 -0.5 758,782 - PS417_03310 0.84 -0.6 758,782 - PS417_03310 0.84 +0.5 758,880 + +1.3 759,150 + PS417_03315 0.51 -2.1 759,208 - PS417_03315 0.62 +1.1 759,230 + PS417_03315 0.66 -0.3 759,230 + PS417_03315 0.66 -1.3 759,231 - PS417_03315 0.67 -0.4 759,231 - PS417_03315 0.67 -0.1 759,291 - PS417_03315 0.78 -0.9 759,291 - PS417_03315 0.78 -1.5 759,291 - PS417_03315 0.78 -0.2 759,291 - PS417_03315 0.78 +1.3 759,379 + -1.1 759,380 - -0.8 759,406 + +0.2 759,406 + +0.9 759,407 - +0.4 759,420 + +0.1 759,421 - -2.3 759,452 - -0.3 759,509 + +1.3 759,678 - PS417_03320 0.11 +0.3 759,858 - PS417_03320 0.26 +0.1 759,858 - PS417_03320 0.26 -1.0 759,879 - PS417_03320 0.28 -0.1
Or see this region's nucleotide sequence