Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24390 and PS417_24395 overlap by 4 nucleotides PS417_24395 and PS417_24400 overlap by 4 nucleotides
PS417_24390: PS417_24390 - peptidase, at 5,294,093 to 5,295,409
_24390
PS417_24395: PS417_24395 - hemolysin D, at 5,295,406 to 5,296,731
_24395
PS417_24400: PS417_24400 - peptidase, at 5,296,728 to 5,298,464
_24400
Position (kb) 5295
5296
5297 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5294.424 kb on + strand, within PS417_24390 at 5294.424 kb on + strand, within PS417_24390 at 5294.519 kb on - strand, within PS417_24390 at 5294.541 kb on + strand, within PS417_24390 at 5294.541 kb on + strand, within PS417_24390 at 5294.542 kb on - strand, within PS417_24390 at 5294.542 kb on - strand at 5294.584 kb on - strand, within PS417_24390 at 5294.632 kb on - strand, within PS417_24390 at 5294.732 kb on + strand, within PS417_24390 at 5294.732 kb on + strand, within PS417_24390 at 5294.912 kb on + strand, within PS417_24390 at 5295.102 kb on + strand, within PS417_24390 at 5295.103 kb on - strand, within PS417_24390 at 5295.111 kb on + strand, within PS417_24390 at 5295.150 kb on + strand, within PS417_24390 at 5295.151 kb on - strand, within PS417_24390 at 5295.151 kb on - strand, within PS417_24390 at 5295.151 kb on - strand, within PS417_24390 at 5295.219 kb on + strand, within PS417_24390 at 5295.219 kb on + strand, within PS417_24390 at 5295.240 kb on - strand, within PS417_24390 at 5295.242 kb on + strand, within PS417_24390 at 5295.324 kb on - strand at 5295.458 kb on + strand at 5295.458 kb on + strand at 5295.458 kb on + strand at 5295.459 kb on - strand at 5295.812 kb on + strand, within PS417_24395 at 5295.813 kb on - strand, within PS417_24395 at 5295.813 kb on - strand, within PS417_24395 at 5296.052 kb on - strand, within PS417_24395 at 5296.062 kb on - strand, within PS417_24395 at 5296.101 kb on - strand, within PS417_24395 at 5296.101 kb on - strand, within PS417_24395 at 5296.401 kb on - strand, within PS417_24395 at 5296.662 kb on - strand at 5296.692 kb on + strand at 5296.693 kb on - strand at 5296.885 kb on - strand at 5296.919 kb on + strand, within PS417_24400 at 5297.136 kb on + strand, within PS417_24400 at 5297.136 kb on + strand, within PS417_24400 at 5297.137 kb on - strand, within PS417_24400
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 5,294,424 + PS417_24390 0.25 -0.7 5,294,424 + PS417_24390 0.25 -0.3 5,294,519 - PS417_24390 0.32 -0.1 5,294,541 + PS417_24390 0.34 +0.4 5,294,541 + PS417_24390 0.34 -2.4 5,294,542 - PS417_24390 0.34 +0.1 5,294,542 - +1.0 5,294,584 - PS417_24390 0.37 -0.4 5,294,632 - PS417_24390 0.41 +0.5 5,294,732 + PS417_24390 0.49 +0.8 5,294,732 + PS417_24390 0.49 +0.2 5,294,912 + PS417_24390 0.62 +0.5 5,295,102 + PS417_24390 0.77 -1.8 5,295,103 - PS417_24390 0.77 -0.7 5,295,111 + PS417_24390 0.77 -0.0 5,295,150 + PS417_24390 0.80 -1.5 5,295,151 - PS417_24390 0.80 -0.1 5,295,151 - PS417_24390 0.80 +0.2 5,295,151 - PS417_24390 0.80 +1.0 5,295,219 + PS417_24390 0.85 -0.2 5,295,219 + PS417_24390 0.85 +0.7 5,295,240 - PS417_24390 0.87 +0.4 5,295,242 + PS417_24390 0.87 -1.8 5,295,324 - -0.8 5,295,458 + +0.2 5,295,458 + +0.1 5,295,458 + +0.4 5,295,459 - -0.2 5,295,812 + PS417_24395 0.31 +0.9 5,295,813 - PS417_24395 0.31 +1.0 5,295,813 - PS417_24395 0.31 +0.4 5,296,052 - PS417_24395 0.49 +0.2 5,296,062 - PS417_24395 0.49 +1.9 5,296,101 - PS417_24395 0.52 +0.0 5,296,101 - PS417_24395 0.52 -1.5 5,296,401 - PS417_24395 0.75 +1.4 5,296,662 - +0.8 5,296,692 + -0.2 5,296,693 - +0.1 5,296,885 - -0.5 5,296,919 + PS417_24400 0.11 -0.4 5,297,136 + PS417_24400 0.23 +0.0 5,297,136 + PS417_24400 0.23 -0.1 5,297,137 - PS417_24400 0.24 -0.5
Or see this region's nucleotide sequence