Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21780 and PS417_21785 are separated by 106 nucleotides PS417_21785 and PS417_21790 are separated by 24 nucleotides PS417_21790 and PS417_21795 are separated by 25 nucleotides
PS417_21780: PS417_21780 - argininosuccinate lyase, at 4,729,782 to 4,731,209
_21780
PS417_21785: PS417_21785 - ABC transporter permease, at 4,731,316 to 4,732,194
_21785
PS417_21790: PS417_21790 - arginine ABC transporter ATP-binding protein, at 4,732,219 to 4,732,983
_21790
PS417_21795: PS417_21795 - ABC transporter substrate-binding protein, at 4,733,009 to 4,733,830
_21795
Position (kb)
4731
4732
4733 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4730.755 kb on + strand, within PS417_21780 at 4730.756 kb on - strand, within PS417_21780 at 4730.793 kb on - strand, within PS417_21780 at 4730.860 kb on + strand, within PS417_21780 at 4731.189 kb on + strand at 4731.207 kb on + strand at 4731.278 kb on + strand at 4731.279 kb on - strand at 4731.286 kb on + strand at 4731.287 kb on - strand at 4731.388 kb on + strand at 4731.413 kb on - strand, within PS417_21785 at 4731.413 kb on - strand, within PS417_21785 at 4731.619 kb on - strand, within PS417_21785 at 4731.619 kb on - strand, within PS417_21785 at 4731.619 kb on - strand, within PS417_21785 at 4731.814 kb on - strand, within PS417_21785 at 4731.829 kb on + strand, within PS417_21785 at 4731.927 kb on + strand, within PS417_21785 at 4731.928 kb on - strand, within PS417_21785 at 4731.971 kb on + strand, within PS417_21785 at 4731.985 kb on - strand, within PS417_21785 at 4731.985 kb on - strand at 4731.990 kb on + strand, within PS417_21785 at 4732.060 kb on + strand, within PS417_21785 at 4732.060 kb on + strand, within PS417_21785 at 4732.063 kb on + strand, within PS417_21785 at 4732.064 kb on - strand, within PS417_21785 at 4732.064 kb on - strand, within PS417_21785 at 4732.112 kb on - strand at 4732.255 kb on + strand at 4732.255 kb on + strand at 4732.255 kb on + strand at 4732.255 kb on + strand at 4732.267 kb on + strand at 4732.268 kb on - strand at 4732.268 kb on - strand at 4732.928 kb on + strand at 4732.932 kb on - strand at 4732.932 kb on - strand at 4732.963 kb on - strand at 4732.981 kb on + strand at 4732.982 kb on - strand at 4732.982 kb on - strand at 4732.986 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 4,730,755 + PS417_21780 0.68 +0.5 4,730,756 - PS417_21780 0.68 +1.9 4,730,793 - PS417_21780 0.71 +2.1 4,730,860 + PS417_21780 0.75 +0.5 4,731,189 + -1.1 4,731,207 + +0.7 4,731,278 + -0.9 4,731,279 - +1.2 4,731,286 + -1.1 4,731,287 - +0.7 4,731,388 + +0.3 4,731,413 - PS417_21785 0.11 -1.1 4,731,413 - PS417_21785 0.11 -0.8 4,731,619 - PS417_21785 0.34 -1.5 4,731,619 - PS417_21785 0.34 -0.0 4,731,619 - PS417_21785 0.34 -0.8 4,731,814 - PS417_21785 0.57 -1.9 4,731,829 + PS417_21785 0.58 -0.0 4,731,927 + PS417_21785 0.70 -0.9 4,731,928 - PS417_21785 0.70 -1.1 4,731,971 + PS417_21785 0.75 -1.1 4,731,985 - PS417_21785 0.76 -0.3 4,731,985 - -0.9 4,731,990 + PS417_21785 0.77 -1.1 4,732,060 + PS417_21785 0.85 -0.1 4,732,060 + PS417_21785 0.85 +2.6 4,732,063 + PS417_21785 0.85 +0.8 4,732,064 - PS417_21785 0.85 -1.3 4,732,064 - PS417_21785 0.85 -0.9 4,732,112 - +0.9 4,732,255 + -0.9 4,732,255 + +0.8 4,732,255 + +0.7 4,732,255 + +1.5 4,732,267 + +1.5 4,732,268 - -0.6 4,732,268 - +0.1 4,732,928 + +0.3 4,732,932 - -0.4 4,732,932 - -0.2 4,732,963 - -0.5 4,732,981 + +0.3 4,732,982 - -0.2 4,732,982 - -0.2 4,732,986 - +0.2
Or see this region's nucleotide sequence