Strain Fitness in Pseudomonas simiae WCS417 around PS417_18120
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,947,191 | + | PS417_18115 | 0.42 | +0.2 | |
3,947,192 | - | -0.5 | |||
3,947,420 | - | PS417_18115 | 0.56 | -0.1 | |
3,947,633 | + | PS417_18115 | 0.70 | +0.6 | |
3,947,795 | - | PS417_18115 | 0.80 | -0.4 | |
3,947,795 | - | PS417_18115 | 0.80 | +1.0 | |
3,948,127 | - | -0.5 | |||
3,948,173 | + | +0.1 | |||
3,948,174 | - | -0.4 | |||
3,948,890 | + | -2.3 | |||
3,948,891 | - | +0.0 | |||
3,949,087 | - | PS417_18125 | 0.19 | -1.3 | |
3,949,104 | + | PS417_18125 | 0.21 | -0.2 | |
3,949,366 | - | PS417_18125 | 0.55 | +1.6 | |
3,949,534 | - | PS417_18125 | 0.76 | -1.2 | |
3,949,534 | - | -0.6 | |||
3,949,534 | - | PS417_18125 | 0.76 | -0.7 | |
3,949,662 | + | -0.0 | |||
3,949,778 | + | -0.8 | |||
3,949,778 | + | +0.7 | |||
3,949,779 | - | -0.1 | |||
3,949,779 | - | -0.5 | |||
3,949,779 | - | +0.3 | |||
3,949,923 | - | PS417_18130 | 0.24 | +0.0 |
Or see this region's nucleotide sequence