Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13540 and PS417_13545 are separated by 333 nucleotides PS417_13545 and PS417_13550 are separated by 25 nucleotides PS417_13550 and PS417_13555 are separated by 2 nucleotides
PS417_13540: PS417_13540 - sodium:proton antiporter, at 2,982,611 to 2,983,963
_13540
PS417_13545: PS417_13545 - arginine aminotransferase, at 2,984,297 to 2,986,291
_13545
PS417_13550: PS417_13550 - amino acid ABC transporter substrate-binding protein, at 2,986,317 to 2,987,171
_13550
PS417_13555: PS417_13555 - ABC transporter permease, at 2,987,174 to 2,987,878
_13555
Position (kb)
2984
2985
2986
2987 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2983.619 kb on - strand, within PS417_13540 at 2983.626 kb on + strand, within PS417_13540 at 2983.626 kb on + strand, within PS417_13540 at 2983.703 kb on - strand, within PS417_13540 at 2983.804 kb on + strand, within PS417_13540 at 2983.897 kb on - strand at 2983.925 kb on + strand at 2983.926 kb on - strand at 2983.949 kb on + strand at 2983.950 kb on - strand at 2983.950 kb on - strand at 2983.955 kb on - strand at 2983.955 kb on - strand at 2984.196 kb on + strand at 2984.225 kb on + strand at 2984.225 kb on + strand at 2984.226 kb on - strand at 2984.226 kb on - strand at 2984.226 kb on - strand at 2984.226 kb on - strand at 2984.226 kb on - strand at 2984.283 kb on + strand at 2984.672 kb on + strand at 2984.672 kb on + strand, within PS417_13545 at 2984.673 kb on - strand, within PS417_13545 at 2984.682 kb on - strand, within PS417_13545 at 2985.240 kb on + strand, within PS417_13545 at 2986.647 kb on + strand, within PS417_13550 at 2986.648 kb on - strand, within PS417_13550 at 2986.648 kb on - strand at 2986.650 kb on + strand, within PS417_13550 at 2986.650 kb on + strand, within PS417_13550 at 2986.664 kb on - strand, within PS417_13550 at 2986.761 kb on + strand, within PS417_13550 at 2986.761 kb on + strand, within PS417_13550 at 2986.762 kb on - strand, within PS417_13550 at 2986.774 kb on - strand, within PS417_13550 at 2986.774 kb on - strand, within PS417_13550 at 2986.800 kb on + strand, within PS417_13550 at 2986.801 kb on - strand, within PS417_13550 at 2987.046 kb on + strand, within PS417_13550
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 2,983,619 - PS417_13540 0.75 +1.1 2,983,626 + PS417_13540 0.75 -1.4 2,983,626 + PS417_13540 0.75 +1.0 2,983,703 - PS417_13540 0.81 -0.7 2,983,804 + PS417_13540 0.88 -0.3 2,983,897 - +0.0 2,983,925 + -2.2 2,983,926 - +1.2 2,983,949 + -0.2 2,983,950 - +1.2 2,983,950 - +0.9 2,983,955 - +0.2 2,983,955 - -1.1 2,984,196 + -0.3 2,984,225 + +0.8 2,984,225 + -0.9 2,984,226 - -0.3 2,984,226 - +0.9 2,984,226 - +0.6 2,984,226 - -0.7 2,984,226 - -2.1 2,984,283 + +0.3 2,984,672 + -1.9 2,984,672 + PS417_13545 0.19 +2.3 2,984,673 - PS417_13545 0.19 +1.9 2,984,682 - PS417_13545 0.19 +0.2 2,985,240 + PS417_13545 0.47 +1.3 2,986,647 + PS417_13550 0.39 -0.6 2,986,648 - PS417_13550 0.39 +0.2 2,986,648 - +0.9 2,986,650 + PS417_13550 0.39 +1.9 2,986,650 + PS417_13550 0.39 -0.5 2,986,664 - PS417_13550 0.41 +0.2 2,986,761 + PS417_13550 0.52 -0.3 2,986,761 + PS417_13550 0.52 +1.0 2,986,762 - PS417_13550 0.52 -0.1 2,986,774 - PS417_13550 0.53 +0.2 2,986,774 - PS417_13550 0.53 +0.5 2,986,800 + PS417_13550 0.56 +0.2 2,986,801 - PS417_13550 0.57 +0.2 2,987,046 + PS417_13550 0.85 +0.9
Or see this region's nucleotide sequence