Strain Fitness in Pseudomonas simiae WCS417 around PS417_11775
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,561,382 | + | -1.3 | |||
2,561,444 | + | +0.2 | |||
2,561,922 | + | PS417_11770 | 0.55 | -0.6 | |
2,561,922 | + | PS417_11770 | 0.55 | +0.4 | |
2,561,955 | + | PS417_11770 | 0.58 | -0.5 | |
2,561,955 | + | -0.6 | |||
2,562,315 | + | +0.2 | |||
2,562,316 | - | +0.7 | |||
2,562,726 | + | PS417_11775 | 0.32 | -1.2 | |
2,562,958 | - | PS417_11775 | 0.53 | -0.1 | |
2,563,097 | + | PS417_11775 | 0.65 | -0.4 | |
2,563,098 | - | PS417_11775 | 0.66 | -1.3 | |
2,563,452 | + | -0.9 | |||
2,563,472 | + | +0.3 | |||
2,563,536 | + | -0.4 | |||
2,563,536 | + | -0.3 | |||
2,563,845 | - | PS417_11780 | 0.40 | +0.1 | |
2,563,845 | - | PS417_11780 | 0.40 | -0.9 | |
2,564,079 | + | PS417_11780 | 0.66 | +0.7 | |
2,564,127 | + | PS417_11780 | 0.72 | +0.5 | |
2,564,127 | + | PS417_11780 | 0.72 | +0.5 | |
2,564,128 | - | PS417_11780 | 0.72 | +0.7 | |
2,564,128 | - | PS417_11780 | 0.72 | +1.0 | |
2,564,220 | + | PS417_11780 | 0.82 | -2.0 | |
2,564,400 | + | -0.0 | |||
2,564,401 | - | -0.4 | |||
2,564,431 | + | +0.6 | |||
2,564,431 | + | -0.6 | |||
2,564,432 | - | -0.2 | |||
2,564,432 | - | -0.6 |
Or see this region's nucleotide sequence