Strain Fitness in Pseudomonas simiae WCS417 around PS417_10430
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,227,178 | + | -1.0 | |||
| 2,227,178 | + | +0.2 | |||
| 2,227,179 | - | +0.6 | |||
| 2,227,458 | + | PS417_10425 | 0.25 | +0.6 | |
| 2,227,840 | - | PS417_10425 | 0.84 | +1.0 | |
| 2,227,957 | + | -0.0 | |||
| 2,227,958 | - | +0.1 | |||
| 2,227,979 | - | +0.4 | |||
| 2,228,066 | + | -1.0 | |||
| 2,228,296 | - | PS417_10430 | 0.46 | +1.2 | |
| 2,228,304 | - | PS417_10430 | 0.48 | -1.1 | |
| 2,228,554 | - | +1.0 | |||
| 2,228,554 | - | +0.3 | |||
| 2,228,554 | - | +0.3 | |||
| 2,228,569 | - | -0.1 | |||
| 2,228,689 | - | +0.3 | |||
| 2,228,761 | - | -0.6 | |||
| 2,229,004 | + | PS417_10435 | 0.30 | -0.6 | |
| 2,229,568 | - | PS417_10435 | 0.76 | -0.4 |
Or see this region's nucleotide sequence