Strain Fitness in Pseudomonas simiae WCS417 around PS417_10420

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
2,225,428	-				+0.5
2,225,759	+				-0.5
2,225,760	-				+0.5
2,225,760	-				+0.5
2,225,949	+		PS417_10415	0.15	-0.0
2,225,950	-		PS417_10415	0.16	-0.5
2,225,973	+		PS417_10415	0.22	+1.0
2,225,974	-		PS417_10415	0.22	+0.3
2,225,974	-				-1.0
2,225,974	-		PS417_10415	0.22	-0.6
2,225,994	+		PS417_10415	0.27	+1.0
2,225,995	-		PS417_10415	0.28	-0.9
2,226,012	+		PS417_10415	0.32	+2.5
2,226,012	+		PS417_10415	0.32	+0.1
2,226,013	-		PS417_10415	0.33	-1.8
2,226,013	-		PS417_10415	0.33	+0.1
2,226,037	-		PS417_10415	0.39	+0.4
2,226,078	+		PS417_10415	0.50	+0.9
2,226,078	+		PS417_10415	0.50	+0.1
2,226,079	-		PS417_10415	0.50	+0.0
2,226,079	-		PS417_10415	0.50	+0.1
2,226,097	-		PS417_10415	0.55	-0.8
2,226,250	+				+0.5
2,226,250	+				+0.1
2,226,304	-				-0.1
2,226,304	-				-0.2
2,226,313	+				+0.7
2,226,313	+				-0.5
2,226,314	-				+1.1
2,226,333	+				-0.2
2,226,344	-				-1.4
2,226,384	-				-0.3
2,226,384	-				-1.1
2,226,537	-				-1.0
2,226,539	+		PS417_10420	0.14	-2.0
2,226,539	+		PS417_10420	0.14	+0.1
2,226,539	+		PS417_10420	0.14	+0.3
2,226,540	-		PS417_10420	0.14	+0.9
2,226,540	-		PS417_10420	0.14	+1.5
2,226,540	-		PS417_10420	0.14	+1.0
2,226,649	-		PS417_10420	0.28	+3.0
2,226,728	+		PS417_10420	0.37	-0.1
2,226,729	-		PS417_10420	0.37	-0.6
2,226,729	-		PS417_10420	0.37	+1.5
2,226,730	+		PS417_10420	0.38	-0.6
2,226,740	+		PS417_10420	0.39	-0.2
2,226,740	+		PS417_10420	0.39	+0.1
2,226,740	+		PS417_10420	0.39	+0.7
2,226,741	-		PS417_10420	0.39	+0.5
2,226,741	-		PS417_10420	0.39	+0.2
2,226,781	+		PS417_10420	0.44	-0.2
2,227,178	+				-1.0
2,227,178	+				+0.2
2,227,179	-				+0.6
2,227,458	+		PS417_10425	0.25	+0.6
2,227,840	-		PS417_10425	0.84	+1.0
2,227,957	+				-0.0
2,227,958	-				+0.1
2,227,979	-				+0.4
2,228,066	+				-1.0