Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00830 and PS417_00835 are separated by 483 nucleotides PS417_00835 and PS417_00840 are separated by 419 nucleotides
PS417_00830: PS417_00830 - hypothetical protein, at 183,570 to 184,313
_00830
PS417_00835: PS417_00835 - hypothetical protein, at 184,797 to 185,834
_00835
PS417_00840: PS417_00840 - hypothetical protein, at 186,254 to 190,063
_00840
Position (kb) 184
185
186 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 184.121 kb on - strand, within PS417_00830 at 184.121 kb on - strand, within PS417_00830 at 184.261 kb on - strand at 184.261 kb on - strand at 184.355 kb on + strand at 184.355 kb on + strand at 184.356 kb on - strand at 184.359 kb on + strand at 184.382 kb on - strand at 184.501 kb on + strand at 184.570 kb on - strand at 184.625 kb on - strand at 184.626 kb on + strand at 184.669 kb on + strand at 184.725 kb on + strand at 185.102 kb on + strand, within PS417_00835 at 185.158 kb on - strand, within PS417_00835 at 185.425 kb on - strand, within PS417_00835 at 185.466 kb on + strand, within PS417_00835 at 185.667 kb on - strand, within PS417_00835 at 185.667 kb on - strand, within PS417_00835 at 185.670 kb on + strand, within PS417_00835 at 185.721 kb on - strand, within PS417_00835 at 185.845 kb on + strand at 185.978 kb on + strand at 185.978 kb on + strand at 185.978 kb on + strand at 185.979 kb on - strand at 186.056 kb on + strand at 186.117 kb on + strand at 186.118 kb on - strand at 186.121 kb on + strand at 186.136 kb on - strand at 186.186 kb on - strand at 186.186 kb on - strand at 186.211 kb on - strand at 186.222 kb on - strand at 186.240 kb on - strand at 186.321 kb on + strand at 186.394 kb on + strand at 186.394 kb on + strand at 186.395 kb on - strand at 186.395 kb on - strand at 186.395 kb on - strand at 186.483 kb on + strand at 186.483 kb on + strand at 186.483 kb on + strand at 186.484 kb on - strand at 186.484 kb on - strand at 186.487 kb on + strand at 186.488 kb on - strand at 186.488 kb on - strand at 186.488 kb on - strand at 186.509 kb on - strand at 186.525 kb on - strand at 186.525 kb on - strand at 186.525 kb on - strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.579 kb on + strand at 186.651 kb on + strand, within PS417_00840 at 186.687 kb on + strand, within PS417_00840 at 186.687 kb on + strand, within PS417_00840 at 186.688 kb on - strand, within PS417_00840 at 186.688 kb on - strand, within PS417_00840 at 186.760 kb on + strand, within PS417_00840 at 186.761 kb on - strand, within PS417_00840 at 186.763 kb on - strand, within PS417_00840 at 186.826 kb on + strand, within PS417_00840
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 184,121 - PS417_00830 0.74 -2.1 184,121 - PS417_00830 0.74 -2.6 184,261 - -0.3 184,261 - -1.3 184,355 + +2.0 184,355 + -0.7 184,356 - -0.0 184,359 + -0.8 184,382 - +0.0 184,501 + -0.8 184,570 - -0.6 184,625 - -0.4 184,626 + -1.3 184,669 + -0.1 184,725 + +0.0 185,102 + PS417_00835 0.29 -0.0 185,158 - PS417_00835 0.35 -1.8 185,425 - PS417_00835 0.61 +0.4 185,466 + PS417_00835 0.64 -0.3 185,667 - PS417_00835 0.84 +0.0 185,667 - PS417_00835 0.84 -1.1 185,670 + PS417_00835 0.84 -0.7 185,721 - PS417_00835 0.89 +0.9 185,845 + -0.8 185,978 + -0.6 185,978 + -1.8 185,978 + +2.0 185,979 - +0.3 186,056 + -0.2 186,117 + -0.4 186,118 - -4.0 186,121 + -0.0 186,136 - +1.0 186,186 - +0.3 186,186 - -1.6 186,211 - -0.3 186,222 - +2.4 186,240 - +1.1 186,321 + +0.8 186,394 + +1.5 186,394 + -0.6 186,395 - -1.8 186,395 - +0.0 186,395 - -0.1 186,483 + +0.1 186,483 + +1.6 186,483 + -0.7 186,484 - +0.3 186,484 - +2.0 186,487 + -0.8 186,488 - +0.6 186,488 - +1.5 186,488 - +0.0 186,509 - +0.2 186,525 - -0.4 186,525 - +0.2 186,525 - -0.8 186,579 + -0.3 186,579 + -1.3 186,579 + -0.6 186,579 + +0.0 186,651 + PS417_00840 0.10 +0.2 186,687 + PS417_00840 0.11 +0.3 186,687 + PS417_00840 0.11 -0.8 186,688 - PS417_00840 0.11 -1.0 186,688 - PS417_00840 0.11 +0.5 186,760 + PS417_00840 0.13 -0.1 186,761 - PS417_00840 0.13 -1.1 186,763 - PS417_00840 0.13 -0.4 186,826 + PS417_00840 0.15 -0.3
Or see this region's nucleotide sequence