Strain Fitness in Pseudomonas simiae WCS417 around PS417_06335
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
1,406,234 | + | PS417_06330 | 0.12 | +0.5 | |
1,406,236 | + | PS417_06330 | 0.12 | -0.3 | |
1,406,363 | + | -1.3 | |||
1,406,480 | + | PS417_06330 | 0.34 | -0.8 | |
1,406,504 | + | PS417_06330 | 0.36 | -0.4 | |
1,406,570 | - | PS417_06330 | 0.42 | +0.5 | |
1,407,274 | + | -0.3 | |||
1,407,541 | + | PS417_06335 | 0.38 | -1.5 | |
1,407,592 | + | PS417_06335 | 0.44 | -1.5 | |
1,407,592 | + | +0.7 | |||
1,407,593 | - | PS417_06335 | 0.44 | -1.0 | |
1,407,593 | - | PS417_06335 | 0.44 | -0.5 | |
1,407,593 | - | PS417_06335 | 0.44 | -3.8 | |
1,407,989 | - | -0.0 | |||
1,408,000 | + | +1.5 | |||
1,408,001 | - | -0.1 | |||
1,408,001 | - | -0.7 | |||
1,408,815 | + | PS417_06345 | 0.21 | -0.9 | |
1,408,815 | + | PS417_06345 | 0.21 | -1.7 | |
1,408,816 | - | PS417_06345 | 0.21 | +0.3 | |
1,408,816 | - | PS417_06345 | 0.21 | -1.5 |
Or see this region's nucleotide sequence