Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06325 and PS417_06330 are separated by 109 nucleotides PS417_06330 and PS417_06335 are separated by 8 nucleotides PS417_06335 and PS417_06340 are separated by 54 nucleotides
PS417_06325: PS417_06325 - LysR family transcriptional regulator, at 1,405,093 to 1,405,989
_06325
PS417_06330: PS417_06330 - S-(hydroxymethyl)glutathione dehydrogenase, at 1,406,099 to 1,407,211
_06330
PS417_06335: PS417_06335 - S-formylglutathione hydrolase, at 1,407,220 to 1,408,065
_06335
PS417_06340: PS417_06340 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 1,408,120 to 1,408,593
_06340
Position (kb)
1406
1407
1408 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1405.127 kb on - strand at 1405.184 kb on + strand, within PS417_06325 at 1405.268 kb on + strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.272 kb on - strand, within PS417_06325 at 1405.422 kb on + strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.447 kb on - strand, within PS417_06325 at 1405.472 kb on + strand, within PS417_06325 at 1405.493 kb on + strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1406.122 kb on - strand at 1406.122 kb on - strand at 1406.234 kb on + strand, within PS417_06330 at 1406.236 kb on + strand, within PS417_06330 at 1406.363 kb on + strand at 1406.480 kb on + strand, within PS417_06330 at 1406.504 kb on + strand, within PS417_06330 at 1406.570 kb on - strand, within PS417_06330 at 1407.274 kb on + strand at 1407.541 kb on + strand, within PS417_06335 at 1407.592 kb on + strand, within PS417_06335 at 1407.592 kb on + strand at 1407.593 kb on - strand, within PS417_06335 at 1407.593 kb on - strand, within PS417_06335 at 1407.593 kb on - strand, within PS417_06335 at 1407.989 kb on - strand at 1408.000 kb on + strand at 1408.001 kb on - strand at 1408.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,405,127 - +0.7 1,405,184 + PS417_06325 0.10 -0.0 1,405,268 + PS417_06325 0.20 -1.3 1,405,269 - PS417_06325 0.20 +1.0 1,405,269 - PS417_06325 0.20 +0.9 1,405,269 - PS417_06325 0.20 +0.6 1,405,271 + PS417_06325 0.20 -0.2 1,405,271 + PS417_06325 0.20 -1.8 1,405,272 - PS417_06325 0.20 -2.0 1,405,422 + PS417_06325 0.37 +1.4 1,405,423 - PS417_06325 0.37 -0.4 1,405,423 - PS417_06325 0.37 +0.8 1,405,446 + PS417_06325 0.39 +0.6 1,405,446 + PS417_06325 0.39 -1.0 1,405,447 - PS417_06325 0.39 +0.4 1,405,472 + PS417_06325 0.42 +0.1 1,405,493 + PS417_06325 0.45 -0.5 1,405,494 - PS417_06325 0.45 -0.4 1,405,494 - PS417_06325 0.45 +0.1 1,405,494 - PS417_06325 0.45 -0.0 1,406,122 - -1.2 1,406,122 - +1.0 1,406,234 + PS417_06330 0.12 +0.5 1,406,236 + PS417_06330 0.12 -0.3 1,406,363 + -1.3 1,406,480 + PS417_06330 0.34 -0.8 1,406,504 + PS417_06330 0.36 -0.4 1,406,570 - PS417_06330 0.42 +0.5 1,407,274 + -0.3 1,407,541 + PS417_06335 0.38 -1.5 1,407,592 + PS417_06335 0.44 -1.5 1,407,592 + +0.7 1,407,593 - PS417_06335 0.44 -1.0 1,407,593 - PS417_06335 0.44 -0.5 1,407,593 - PS417_06335 0.44 -3.8 1,407,989 - -0.0 1,408,000 + +1.5 1,408,001 - -0.1 1,408,001 - -0.7
Or see this region's nucleotide sequence