Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06310 and PS417_06315 are separated by 184 nucleotides PS417_06315 and PS417_06320 overlap by 4 nucleotides PS417_06320 and PS417_06325 are separated by 129 nucleotides
PS417_06310: PS417_06310 - enolase, at 1,402,507 to 1,403,796
_06310
PS417_06315: PS417_06315 - cell division protein FtsB, at 1,403,981 to 1,404,259
_06315
PS417_06320: PS417_06320 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,404,256 to 1,404,963
_06320
PS417_06325: PS417_06325 - LysR family transcriptional regulator, at 1,405,093 to 1,405,989
_06325
Position (kb)
1404
1405 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1403.767 kb on + strand at 1403.767 kb on + strand at 1403.874 kb on + strand at 1405.127 kb on - strand at 1405.184 kb on + strand, within PS417_06325 at 1405.268 kb on + strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.269 kb on - strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.271 kb on + strand, within PS417_06325 at 1405.272 kb on - strand, within PS417_06325 at 1405.422 kb on + strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.423 kb on - strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.446 kb on + strand, within PS417_06325 at 1405.447 kb on - strand, within PS417_06325 at 1405.472 kb on + strand, within PS417_06325 at 1405.493 kb on + strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325 at 1405.494 kb on - strand, within PS417_06325
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,403,767 + +2.0 1,403,767 + -2.0 1,403,874 + +0.8 1,405,127 - +0.7 1,405,184 + PS417_06325 0.10 -0.0 1,405,268 + PS417_06325 0.20 -1.3 1,405,269 - PS417_06325 0.20 +1.0 1,405,269 - PS417_06325 0.20 +0.9 1,405,269 - PS417_06325 0.20 +0.6 1,405,271 + PS417_06325 0.20 -0.2 1,405,271 + PS417_06325 0.20 -1.8 1,405,272 - PS417_06325 0.20 -2.0 1,405,422 + PS417_06325 0.37 +1.4 1,405,423 - PS417_06325 0.37 -0.4 1,405,423 - PS417_06325 0.37 +0.8 1,405,446 + PS417_06325 0.39 +0.6 1,405,446 + PS417_06325 0.39 -1.0 1,405,447 - PS417_06325 0.39 +0.4 1,405,472 + PS417_06325 0.42 +0.1 1,405,493 + PS417_06325 0.45 -0.5 1,405,494 - PS417_06325 0.45 -0.4 1,405,494 - PS417_06325 0.45 +0.1 1,405,494 - PS417_06325 0.45 -0.0
Or see this region's nucleotide sequence