Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21160 and PS417_21165 are separated by 93 nucleotides PS417_21165 and PS417_21170 are separated by 54 nucleotides PS417_21170 and PS417_21175 are separated by 119 nucleotides
PS417_21160: PS417_21160 - membrane protein, at 4,603,279 to 4,604,247
_21160
PS417_21165: PS417_21165 - LysR family transcriptional regulator, at 4,604,341 to 4,605,225
_21165
PS417_21170: PS417_21170 - membrane protein, at 4,605,280 to 4,605,858
_21170
PS417_21175: PS417_21175 - hypothetical protein, at 4,605,978 to 4,606,610
_21175
Position (kb) 4604
4605
4606 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4603.412 kb on + strand, within PS417_21160 at 4603.642 kb on + strand, within PS417_21160 at 4603.642 kb on + strand, within PS417_21160 at 4603.656 kb on - strand, within PS417_21160 at 4603.917 kb on - strand, within PS417_21160 at 4603.922 kb on + strand, within PS417_21160 at 4603.939 kb on + strand, within PS417_21160 at 4603.940 kb on - strand, within PS417_21160 at 4603.944 kb on + strand, within PS417_21160 at 4604.113 kb on - strand, within PS417_21160 at 4604.231 kb on - strand at 4604.299 kb on - strand at 4604.299 kb on - strand at 4604.331 kb on - strand at 4604.434 kb on - strand, within PS417_21165 at 4604.660 kb on + strand, within PS417_21165 at 4604.860 kb on + strand, within PS417_21165 at 4604.868 kb on - strand, within PS417_21165 at 4604.868 kb on - strand, within PS417_21165 at 4604.868 kb on - strand, within PS417_21165 at 4605.211 kb on + strand at 4605.212 kb on - strand at 4605.215 kb on + strand at 4605.216 kb on - strand at 4605.424 kb on + strand, within PS417_21170 at 4605.511 kb on + strand, within PS417_21170 at 4605.512 kb on - strand, within PS417_21170 at 4605.512 kb on - strand, within PS417_21170 at 4605.514 kb on + strand, within PS417_21170 at 4605.586 kb on + strand, within PS417_21170 at 4605.587 kb on - strand, within PS417_21170 at 4605.587 kb on - strand, within PS417_21170 at 4605.607 kb on + strand, within PS417_21170 at 4605.762 kb on + strand, within PS417_21170 at 4605.763 kb on - strand, within PS417_21170 at 4605.909 kb on + strand at 4605.909 kb on + strand at 4605.910 kb on - strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.913 kb on + strand at 4605.914 kb on - strand at 4605.914 kb on - strand at 4605.914 kb on - strand at 4605.914 kb on - strand at 4605.936 kb on + strand at 4605.937 kb on - strand at 4605.973 kb on + strand at 4605.973 kb on + strand at 4606.223 kb on - strand, within PS417_21175
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 4,603,412 + PS417_21160 0.14 +0.9 4,603,642 + PS417_21160 0.37 -2.1 4,603,642 + PS417_21160 0.37 +0.9 4,603,656 - PS417_21160 0.39 -0.5 4,603,917 - PS417_21160 0.66 +0.3 4,603,922 + PS417_21160 0.66 +1.9 4,603,939 + PS417_21160 0.68 -0.4 4,603,940 - PS417_21160 0.68 +0.7 4,603,944 + PS417_21160 0.69 -0.9 4,604,113 - PS417_21160 0.86 -0.2 4,604,231 - +0.1 4,604,299 - -0.2 4,604,299 - -0.1 4,604,331 - +1.7 4,604,434 - PS417_21165 0.11 -1.0 4,604,660 + PS417_21165 0.36 -2.0 4,604,860 + PS417_21165 0.59 +0.2 4,604,868 - PS417_21165 0.60 -0.1 4,604,868 - PS417_21165 0.60 -0.7 4,604,868 - PS417_21165 0.60 -0.9 4,605,211 + -1.5 4,605,212 - -1.5 4,605,215 + -0.1 4,605,216 - +0.1 4,605,424 + PS417_21170 0.25 -0.1 4,605,511 + PS417_21170 0.40 +0.0 4,605,512 - PS417_21170 0.40 +1.5 4,605,512 - PS417_21170 0.40 -0.7 4,605,514 + PS417_21170 0.40 -0.2 4,605,586 + PS417_21170 0.53 -0.7 4,605,587 - PS417_21170 0.53 -0.6 4,605,587 - PS417_21170 0.53 -1.1 4,605,607 + PS417_21170 0.56 +2.2 4,605,762 + PS417_21170 0.83 +0.3 4,605,763 - PS417_21170 0.83 +0.2 4,605,909 + +0.3 4,605,909 + +0.5 4,605,910 - +0.3 4,605,913 + +0.2 4,605,913 + +0.4 4,605,913 + +0.5 4,605,913 + +0.0 4,605,913 + -0.6 4,605,913 + -0.6 4,605,913 + -0.4 4,605,914 - +0.1 4,605,914 - -0.1 4,605,914 - +0.1 4,605,914 - +0.9 4,605,936 + +1.2 4,605,937 - +0.5 4,605,973 + +0.4 4,605,973 + +0.9 4,606,223 - PS417_21175 0.39 +2.5
Or see this region's nucleotide sequence