Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17230 and PS417_17235 are separated by 112 nucleotides PS417_17235 and PS417_17240 are separated by 91 nucleotides PS417_17240 and PS417_17245 are separated by 401 nucleotides PS417_17245 and PS417_17250 are separated by 77 nucleotides PS417_17250 and PS417_17255 are separated by 56 nucleotides PS417_17255 and PS417_17260 are separated by 32 nucleotides
PS417_17230: PS417_17230 - Clp protease ATP-binding protein, at 3,765,321 to 3,766,604
_17230
PS417_17235: PS417_17235 - Clp protease ClpP, at 3,766,717 to 3,767,352
_17235
PS417_17240: PS417_17240 - trigger factor, at 3,767,444 to 3,768,754
_17240
PS417_17245: PS417_17245 - tRNA-His, at 3,769,156 to 3,769,231
_17245
PS417_17250: PS417_17250 - tRNA-Leu, at 3,769,309 to 3,769,393
_17250
PS417_17255: PS417_17255 - tRNA-His, at 3,769,450 to 3,769,525
_17255
PS417_17260: PS417_17260 - tRNA-Arg, at 3,769,558 to 3,769,634
_17260
Position (kb)
3767
3768
3769 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3766.715 kb on + strand at 3766.715 kb on + strand at 3766.716 kb on - strand at 3767.374 kb on - strand at 3767.395 kb on - strand at 3767.593 kb on - strand, within PS417_17240 at 3767.593 kb on - strand, within PS417_17240 at 3768.311 kb on - strand, within PS417_17240 at 3768.442 kb on - strand, within PS417_17240 at 3768.472 kb on + strand, within PS417_17240 at 3768.472 kb on + strand, within PS417_17240 at 3768.758 kb on + strand at 3768.921 kb on - strand at 3768.957 kb on + strand at 3768.958 kb on - strand at 3768.958 kb on - strand at 3768.959 kb on + strand at 3768.959 kb on + strand at 3768.959 kb on + strand at 3768.959 kb on + strand at 3768.959 kb on + strand at 3768.959 kb on + strand at 3768.960 kb on - strand at 3768.960 kb on - strand at 3768.960 kb on - strand at 3768.960 kb on - strand at 3768.961 kb on + strand at 3768.961 kb on + strand at 3768.962 kb on - strand at 3768.962 kb on - strand at 3768.962 kb on - strand at 3768.962 kb on - strand at 3768.962 kb on - strand at 3768.962 kb on - strand at 3768.964 kb on - strand at 3768.964 kb on - strand at 3769.040 kb on - strand at 3769.043 kb on + strand at 3769.043 kb on + strand at 3769.044 kb on - strand at 3769.044 kb on - strand at 3769.044 kb on - strand at 3769.044 kb on - strand at 3769.044 kb on - strand at 3769.044 kb on - strand at 3769.047 kb on + strand at 3769.048 kb on - strand at 3769.079 kb on - strand at 3769.096 kb on - strand at 3769.134 kb on + strand at 3769.234 kb on + strand at 3769.305 kb on + strand at 3769.305 kb on + strand at 3769.306 kb on - strand at 3769.429 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 3,766,715 + -0.5 3,766,715 + -2.2 3,766,716 - +0.8 3,767,374 - -0.3 3,767,395 - +0.2 3,767,593 - PS417_17240 0.11 -1.4 3,767,593 - PS417_17240 0.11 -1.4 3,768,311 - PS417_17240 0.66 -4.1 3,768,442 - PS417_17240 0.76 -1.1 3,768,472 + PS417_17240 0.78 -1.3 3,768,472 + PS417_17240 0.78 -1.6 3,768,758 + -0.7 3,768,921 - +0.8 3,768,957 + +0.6 3,768,958 - +1.0 3,768,958 - +0.6 3,768,959 + +0.8 3,768,959 + -1.2 3,768,959 + -0.6 3,768,959 + +0.1 3,768,959 + +0.7 3,768,959 + -0.9 3,768,960 - -0.5 3,768,960 - -0.1 3,768,960 - -1.4 3,768,960 - +1.4 3,768,961 + +0.2 3,768,961 + -0.5 3,768,962 - -0.9 3,768,962 - -0.2 3,768,962 - +0.6 3,768,962 - -0.7 3,768,962 - -0.1 3,768,962 - -0.5 3,768,964 - -1.2 3,768,964 - -2.5 3,769,040 - +3.1 3,769,043 + +0.6 3,769,043 + -0.1 3,769,044 - -0.5 3,769,044 - -1.4 3,769,044 - +0.2 3,769,044 - +0.2 3,769,044 - +0.0 3,769,044 - +0.8 3,769,047 + +3.4 3,769,048 - +0.1 3,769,079 - +0.6 3,769,096 - +0.6 3,769,134 + +0.2 3,769,234 + +0.5 3,769,305 + -0.2 3,769,305 + +0.1 3,769,306 - -0.2 3,769,429 - +0.2
Or see this region's nucleotide sequence