Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03415 and PS417_03420 are separated by 180 nucleotides PS417_03420 and PS417_03430 are separated by 576 nucleotides
PS417_03415: PS417_03415 - isomerase, at 783,685 to 784,464
_03415
PS417_03420: PS417_03420 - hypothetical protein, at 784,645 to 788,943
_03420
PS417_03430: PS417_03430 - methyltransferase type 11, at 789,520 to 790,326
_03430
Position (kb) 784
785
786
787
788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 783.710 kb on + strand at 783.711 kb on - strand at 783.846 kb on + strand, within PS417_03415 at 783.847 kb on - strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.028 kb on + strand, within PS417_03415 at 784.320 kb on - strand, within PS417_03415 at 784.452 kb on + strand at 784.481 kb on - strand at 784.481 kb on - strand at 784.499 kb on + strand at 784.500 kb on - strand at 784.500 kb on - strand at 784.608 kb on + strand at 784.608 kb on + strand at 784.609 kb on - strand at 784.638 kb on + strand at 784.744 kb on + strand at 784.867 kb on + strand at 784.868 kb on - strand at 784.868 kb on - strand at 784.902 kb on + strand at 784.903 kb on - strand at 785.239 kb on - strand, within PS417_03420 at 785.598 kb on - strand, within PS417_03420 at 785.821 kb on + strand, within PS417_03420 at 785.821 kb on + strand, within PS417_03420 at 785.821 kb on + strand, within PS417_03420 at 785.821 kb on + strand, within PS417_03420 at 785.821 kb on + strand, within PS417_03420 at 785.822 kb on - strand, within PS417_03420 at 785.822 kb on - strand, within PS417_03420 at 786.127 kb on + strand, within PS417_03420 at 786.136 kb on - strand, within PS417_03420 at 786.183 kb on + strand, within PS417_03420 at 786.264 kb on + strand, within PS417_03420 at 786.390 kb on + strand, within PS417_03420 at 786.589 kb on + strand, within PS417_03420 at 786.590 kb on - strand, within PS417_03420 at 786.590 kb on - strand, within PS417_03420 at 786.590 kb on - strand, within PS417_03420 at 786.860 kb on - strand, within PS417_03420 at 787.068 kb on + strand, within PS417_03420 at 787.204 kb on + strand, within PS417_03420 at 787.204 kb on + strand, within PS417_03420 at 787.205 kb on - strand, within PS417_03420 at 787.205 kb on - strand, within PS417_03420 at 787.329 kb on - strand, within PS417_03420 at 787.455 kb on + strand, within PS417_03420 at 787.467 kb on - strand, within PS417_03420 at 787.467 kb on - strand, within PS417_03420 at 787.470 kb on + strand, within PS417_03420 at 787.559 kb on + strand, within PS417_03420 at 787.560 kb on - strand, within PS417_03420 at 787.718 kb on - strand, within PS417_03420 at 787.755 kb on + strand at 787.755 kb on + strand, within PS417_03420 at 787.817 kb on - strand, within PS417_03420 at 787.856 kb on + strand, within PS417_03420 at 787.856 kb on + strand, within PS417_03420 at 787.857 kb on - strand, within PS417_03420 at 787.857 kb on - strand, within PS417_03420 at 788.195 kb on - strand, within PS417_03420 at 788.195 kb on - strand, within PS417_03420 at 788.448 kb on + strand, within PS417_03420 at 788.449 kb on - strand, within PS417_03420 at 788.704 kb on + strand at 788.704 kb on + strand at 788.704 kb on + strand at 788.705 kb on - strand at 788.705 kb on - strand at 788.815 kb on + strand at 788.947 kb on + strand at 788.947 kb on + strand at 789.058 kb on - strand at 789.058 kb on - strand at 789.138 kb on + strand at 789.199 kb on + strand at 789.199 kb on + strand at 789.631 kb on + strand, within PS417_03430 at 789.632 kb on - strand, within PS417_03430 at 789.669 kb on + strand, within PS417_03430 at 789.670 kb on - strand, within PS417_03430
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 783,710 + +0.1 783,711 - -0.2 783,846 + PS417_03415 0.21 -1.7 783,847 - PS417_03415 0.21 -0.6 784,028 + PS417_03415 0.44 +0.2 784,028 + PS417_03415 0.44 -0.1 784,028 + PS417_03415 0.44 +0.7 784,320 - PS417_03415 0.81 -0.3 784,452 + -0.3 784,481 - +3.9 784,481 - +0.2 784,499 + -0.6 784,500 - -0.4 784,500 - +2.1 784,608 + -0.6 784,608 + +0.1 784,609 - +1.1 784,638 + -0.5 784,744 + +1.3 784,867 + -0.0 784,868 - -0.4 784,868 - -0.5 784,902 + -1.0 784,903 - +0.5 785,239 - PS417_03420 0.14 -1.0 785,598 - PS417_03420 0.22 -1.1 785,821 + PS417_03420 0.27 +0.3 785,821 + PS417_03420 0.27 +1.3 785,821 + PS417_03420 0.27 -0.2 785,821 + PS417_03420 0.27 +0.4 785,821 + PS417_03420 0.27 +0.4 785,822 - PS417_03420 0.27 +0.3 785,822 - PS417_03420 0.27 +0.4 786,127 + PS417_03420 0.34 -0.6 786,136 - PS417_03420 0.35 -1.3 786,183 + PS417_03420 0.36 -0.7 786,264 + PS417_03420 0.38 -1.3 786,390 + PS417_03420 0.41 -0.5 786,589 + PS417_03420 0.45 -0.2 786,590 - PS417_03420 0.45 -0.6 786,590 - PS417_03420 0.45 -2.0 786,590 - PS417_03420 0.45 -0.9 786,860 - PS417_03420 0.52 -2.6 787,068 + PS417_03420 0.56 -0.8 787,204 + PS417_03420 0.60 -1.4 787,204 + PS417_03420 0.60 +0.7 787,205 - PS417_03420 0.60 +3.3 787,205 - PS417_03420 0.60 -0.0 787,329 - PS417_03420 0.62 -0.3 787,455 + PS417_03420 0.65 -1.2 787,467 - PS417_03420 0.66 -0.3 787,467 - PS417_03420 0.66 -0.1 787,470 + PS417_03420 0.66 +1.2 787,559 + PS417_03420 0.68 +0.1 787,560 - PS417_03420 0.68 -0.2 787,718 - PS417_03420 0.71 -1.0 787,755 + +2.3 787,755 + PS417_03420 0.72 -0.2 787,817 - PS417_03420 0.74 -0.6 787,856 + PS417_03420 0.75 -0.4 787,856 + PS417_03420 0.75 -0.8 787,857 - PS417_03420 0.75 -0.3 787,857 - PS417_03420 0.75 +0.4 788,195 - PS417_03420 0.83 +0.5 788,195 - PS417_03420 0.83 -0.5 788,448 + PS417_03420 0.88 +1.0 788,449 - PS417_03420 0.88 -2.9 788,704 + -0.8 788,704 + -0.6 788,704 + -0.5 788,705 - +0.4 788,705 - -0.0 788,815 + -1.2 788,947 + -0.6 788,947 + +0.1 789,058 - +0.1 789,058 - +0.5 789,138 + +0.8 789,199 + -0.2 789,199 + -0.3 789,631 + PS417_03430 0.14 +0.7 789,632 - PS417_03430 0.14 +0.3 789,669 + PS417_03430 0.18 +1.2 789,670 - PS417_03430 0.19 -0.2
Or see this region's nucleotide sequence