Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03320 and PS417_03325 are separated by 122 nucleotides PS417_03325 and PS417_03330 are separated by 261 nucleotides
PS417_03320: PS417_03320 - hypothetical protein, at 759,550 to 760,719
_03320
PS417_03325: PS417_03325 - acid phosphatase, at 760,842 to 762,542
_03325
PS417_03330: PS417_03330 - Short chain fatty acid transporter, at 762,804 to 764,222
_03330
Position (kb) 760
761
762
763 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 759.858 kb on - strand, within PS417_03320 at 759.858 kb on - strand, within PS417_03320 at 759.879 kb on - strand, within PS417_03320 at 760.076 kb on + strand, within PS417_03320 at 760.088 kb on + strand, within PS417_03320 at 760.266 kb on - strand, within PS417_03320 at 760.344 kb on + strand, within PS417_03320 at 760.344 kb on + strand, within PS417_03320 at 760.345 kb on - strand, within PS417_03320 at 760.346 kb on + strand, within PS417_03320 at 760.538 kb on + strand, within PS417_03320 at 760.719 kb on + strand at 760.719 kb on + strand at 760.806 kb on + strand at 760.987 kb on + strand at 761.249 kb on - strand, within PS417_03325 at 761.384 kb on - strand, within PS417_03325 at 761.611 kb on + strand, within PS417_03325 at 761.821 kb on + strand, within PS417_03325 at 761.821 kb on + strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 762.013 kb on + strand, within PS417_03325 at 762.086 kb on - strand, within PS417_03325 at 762.113 kb on - strand, within PS417_03325 at 762.510 kb on + strand at 762.634 kb on + strand at 762.656 kb on + strand at 762.727 kb on - strand at 762.727 kb on - strand at 762.852 kb on + strand at 762.955 kb on + strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.997 kb on + strand, within PS417_03330 at 763.025 kb on - strand, within PS417_03330 at 763.054 kb on + strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.117 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.178 kb on + strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 759,858 - PS417_03320 0.26 -0.6 759,858 - PS417_03320 0.26 -0.0 759,879 - PS417_03320 0.28 -0.3 760,076 + PS417_03320 0.45 -0.6 760,088 + PS417_03320 0.46 -1.3 760,266 - PS417_03320 0.61 -1.2 760,344 + PS417_03320 0.68 -1.3 760,344 + PS417_03320 0.68 -0.4 760,345 - PS417_03320 0.68 -0.2 760,346 + PS417_03320 0.68 -2.9 760,538 + PS417_03320 0.84 +0.1 760,719 + +2.3 760,719 + -1.5 760,806 + +1.3 760,987 + -0.7 761,249 - PS417_03325 0.24 -0.5 761,384 - PS417_03325 0.32 +1.3 761,611 + PS417_03325 0.45 -0.3 761,821 + PS417_03325 0.58 +0.3 761,821 + PS417_03325 0.58 -0.8 761,822 - PS417_03325 0.58 -0.3 761,822 - PS417_03325 0.58 -1.9 762,013 + PS417_03325 0.69 -0.5 762,086 - PS417_03325 0.73 -2.1 762,113 - PS417_03325 0.75 -0.6 762,510 + +0.3 762,634 + -0.2 762,656 + +1.3 762,727 - +0.1 762,727 - -1.9 762,852 + -1.0 762,955 + PS417_03330 0.11 +0.1 762,956 - PS417_03330 0.11 -0.6 762,956 - PS417_03330 0.11 -0.7 762,956 - PS417_03330 0.11 -0.8 762,956 - PS417_03330 0.11 -1.6 762,997 + PS417_03330 0.14 +0.2 763,025 - PS417_03330 0.16 +0.9 763,054 + PS417_03330 0.18 +1.7 763,055 - PS417_03330 0.18 -0.7 763,055 - PS417_03330 0.18 +1.0 763,117 + PS417_03330 0.22 -0.4 763,138 + PS417_03330 0.24 -0.5 763,138 + PS417_03330 0.24 +0.5 763,138 + PS417_03330 0.24 -0.6 763,138 + PS417_03330 0.24 -0.0 763,138 + PS417_03330 0.24 -0.5 763,139 - PS417_03330 0.24 -0.2 763,139 - PS417_03330 0.24 +0.1 763,178 + PS417_03330 0.26 -0.4 763,179 - PS417_03330 0.26 +0.7 763,179 - PS417_03330 0.26 -0.0 763,179 - PS417_03330 0.26 +0.3
Or see this region's nucleotide sequence