Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03145 and PS417_03150 are separated by 124 nucleotides PS417_03150 and PS417_03155 are separated by 145 nucleotides PS417_03155 and PS417_03160 overlap by 4 nucleotides
PS417_03145: PS417_03145 - acetyl-CoA acetyltransferase, at 721,867 to 723,144
_03145
PS417_03150: PS417_03150 - kinase, at 723,269 to 724,165
_03150
PS417_03155: PS417_03155 - transcriptional regulator, at 724,311 to 724,712
_03155
PS417_03160: PS417_03160 - metal ABC transporter ATPase, at 724,709 to 726,910
_03160
Position (kb) 723
724
725 Strain fitness (log2 ratio) -2
-1
0
1
2 at 722.673 kb on - strand, within PS417_03145 at 722.851 kb on + strand, within PS417_03145 at 722.985 kb on + strand, within PS417_03145 at 723.037 kb on - strand at 723.037 kb on - strand at 723.037 kb on - strand at 723.153 kb on + strand at 723.168 kb on + strand at 723.216 kb on + strand at 723.217 kb on - strand at 723.217 kb on - strand at 723.231 kb on - strand at 723.237 kb on - strand at 723.247 kb on - strand at 723.280 kb on + strand at 723.280 kb on + strand at 723.281 kb on - strand at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.363 kb on - strand, within PS417_03150 at 723.621 kb on + strand, within PS417_03150 at 723.621 kb on + strand, within PS417_03150 at 723.685 kb on - strand, within PS417_03150 at 723.838 kb on - strand, within PS417_03150 at 723.903 kb on - strand, within PS417_03150 at 723.966 kb on - strand, within PS417_03150 at 723.997 kb on - strand, within PS417_03150 at 723.997 kb on - strand, within PS417_03150 at 724.294 kb on + strand at 724.566 kb on - strand, within PS417_03155 at 724.600 kb on - strand, within PS417_03155 at 724.654 kb on + strand, within PS417_03155 at 724.654 kb on + strand, within PS417_03155 at 724.860 kb on + strand at 724.860 kb on + strand at 724.899 kb on + strand at 724.900 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 722,673 - PS417_03145 0.63 -1.8 722,851 + PS417_03145 0.77 -0.8 722,985 + PS417_03145 0.87 -0.3 723,037 - +0.9 723,037 - +0.0 723,037 - -0.9 723,153 + +0.2 723,168 + +0.2 723,216 + -1.1 723,217 - -1.1 723,217 - +0.7 723,231 - -1.2 723,237 - +0.1 723,247 - +0.0 723,280 + -0.5 723,280 + -0.2 723,281 - +0.1 723,362 + PS417_03150 0.10 +0.3 723,362 + PS417_03150 0.10 +1.7 723,362 + PS417_03150 0.10 -0.5 723,362 + PS417_03150 0.10 +0.4 723,362 + PS417_03150 0.10 +0.9 723,363 - PS417_03150 0.10 -1.8 723,621 + PS417_03150 0.39 +0.9 723,621 + PS417_03150 0.39 -1.1 723,685 - PS417_03150 0.46 +2.3 723,838 - PS417_03150 0.63 +0.3 723,903 - PS417_03150 0.71 +0.4 723,966 - PS417_03150 0.78 -1.3 723,997 - PS417_03150 0.81 -0.1 723,997 - PS417_03150 0.81 +1.4 724,294 + -0.5 724,566 - PS417_03155 0.63 -0.2 724,600 - PS417_03155 0.72 -1.6 724,654 + PS417_03155 0.85 +0.6 724,654 + PS417_03155 0.85 +1.2 724,860 + -0.1 724,860 + -0.4 724,899 + -1.9 724,900 - -1.7
Or see this region's nucleotide sequence