Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00285 and PS417_00290 are separated by 85 nucleotides PS417_00290 and PS417_00295 are separated by 131 nucleotides
PS417_00285: PS417_00285 - carbonate dehydratase, at 55,595 to 56,326
_00285
PS417_00290: PS417_00290 - SulP family inorganic anion transporter, at 56,412 to 57,959
_00290
PS417_00295: PS417_00295 - hypothetical protein, at 58,091 to 58,738
_00295
Position (kb) 56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 55.525 kb on + strand at 55.526 kb on - strand at 55.526 kb on - strand at 55.526 kb on - strand at 55.577 kb on + strand at 55.610 kb on - strand at 55.939 kb on - strand, within PS417_00285 at 55.939 kb on - strand, within PS417_00285 at 56.196 kb on + strand, within PS417_00285 at 56.196 kb on + strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.201 kb on - strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.216 kb on + strand, within PS417_00285 at 56.324 kb on + strand at 56.437 kb on + strand at 56.763 kb on + strand, within PS417_00290 at 56.763 kb on + strand, within PS417_00290 at 56.764 kb on - strand, within PS417_00290 at 56.764 kb on - strand, within PS417_00290 at 56.768 kb on + strand, within PS417_00290 at 56.769 kb on - strand, within PS417_00290 at 56.801 kb on - strand, within PS417_00290 at 56.958 kb on + strand, within PS417_00290 at 56.959 kb on - strand, within PS417_00290 at 56.959 kb on - strand, within PS417_00290 at 57.019 kb on + strand, within PS417_00290 at 57.020 kb on - strand, within PS417_00290 at 57.333 kb on - strand, within PS417_00290 at 57.471 kb on + strand, within PS417_00290 at 57.542 kb on + strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.547 kb on - strand, within PS417_00290 at 57.595 kb on + strand, within PS417_00290 at 57.595 kb on + strand, within PS417_00290 at 57.802 kb on - strand, within PS417_00290 at 57.802 kb on - strand, within PS417_00290 at 57.934 kb on + strand at 57.934 kb on + strand at 57.935 kb on - strand at 58.077 kb on - strand at 58.080 kb on - strand at 58.080 kb on - strand at 58.256 kb on + strand, within PS417_00295 at 58.364 kb on - strand, within PS417_00295 at 58.365 kb on + strand, within PS417_00295 at 58.365 kb on + strand, within PS417_00295 at 58.366 kb on - strand, within PS417_00295 at 58.366 kb on - strand, within PS417_00295 at 58.404 kb on + strand, within PS417_00295 at 58.405 kb on - strand, within PS417_00295 at 58.405 kb on - strand, within PS417_00295 at 58.573 kb on - strand, within PS417_00295 at 58.761 kb on + strand at 58.762 kb on - strand at 58.783 kb on + strand at 58.784 kb on - strand at 58.784 kb on - strand at 58.792 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.875 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 55,525 + -0.2 55,526 - -0.2 55,526 - +1.9 55,526 - -0.6 55,577 + +1.4 55,610 - +2.4 55,939 - PS417_00285 0.47 +0.6 55,939 - PS417_00285 0.47 -1.5 56,196 + PS417_00285 0.82 -0.3 56,196 + PS417_00285 0.82 +1.2 56,201 - PS417_00285 0.83 -0.0 56,201 - PS417_00285 0.83 -0.3 56,201 - PS417_00285 0.83 +0.4 56,216 + PS417_00285 0.85 +1.5 56,216 + PS417_00285 0.85 +0.5 56,216 + PS417_00285 0.85 -0.5 56,216 + PS417_00285 0.85 +0.1 56,324 + -1.8 56,437 + +0.7 56,763 + PS417_00290 0.23 -1.9 56,763 + PS417_00290 0.23 +0.8 56,764 - PS417_00290 0.23 +0.3 56,764 - PS417_00290 0.23 -1.0 56,768 + PS417_00290 0.23 -1.2 56,769 - PS417_00290 0.23 -1.9 56,801 - PS417_00290 0.25 +0.0 56,958 + PS417_00290 0.35 +0.6 56,959 - PS417_00290 0.35 -2.3 56,959 - PS417_00290 0.35 +1.6 57,019 + PS417_00290 0.39 +0.8 57,020 - PS417_00290 0.39 +1.6 57,333 - PS417_00290 0.59 +0.4 57,471 + PS417_00290 0.68 +0.0 57,542 + PS417_00290 0.73 +1.8 57,543 - PS417_00290 0.73 +0.0 57,543 - PS417_00290 0.73 +2.4 57,543 - PS417_00290 0.73 +0.9 57,547 - PS417_00290 0.73 +0.8 57,595 + PS417_00290 0.76 +0.3 57,595 + PS417_00290 0.76 +2.4 57,802 - PS417_00290 0.90 +0.0 57,802 - PS417_00290 0.90 +1.4 57,934 + -0.3 57,934 + +0.1 57,935 - -0.9 58,077 - +0.2 58,080 - +0.4 58,080 - +0.3 58,256 + PS417_00295 0.25 +0.6 58,364 - PS417_00295 0.42 -0.4 58,365 + PS417_00295 0.42 -0.1 58,365 + PS417_00295 0.42 -1.6 58,366 - PS417_00295 0.42 -1.4 58,366 - PS417_00295 0.42 -0.4 58,404 + PS417_00295 0.48 -0.4 58,405 - PS417_00295 0.48 +0.5 58,405 - PS417_00295 0.48 -0.2 58,573 - PS417_00295 0.74 -0.3 58,761 + -1.4 58,762 - -1.3 58,783 + -0.1 58,784 - -0.4 58,784 - +0.0 58,792 + +0.2 58,794 + -0.8 58,794 + +0.8 58,794 + +0.1 58,794 + -1.5 58,875 + +4.4
Or see this region's nucleotide sequence