Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27870 and PS417_27875 are separated by 127 nucleotides PS417_27875 and PS417_27880 are separated by 117 nucleotides PS417_27880 and PS417_27885 are separated by 124 nucleotides
PS417_27870: PS417_27870 - ATP-dependent DNA helicase RecG, at 6,006,868 to 6,008,943
_27870
PS417_27875: PS417_27875 - histidine kinase, at 6,009,071 to 6,010,471
_27875
PS417_27880: PS417_27880 - helicase, at 6,010,589 to 6,010,963
_27880
PS417_27885: PS417_27885 - hypothetical protein, at 6,011,088 to 6,012,008
_27885
Position (kb)
6009
6010
6011 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 6008.119 kb on - strand, within PS417_27870 at 6008.321 kb on - strand, within PS417_27870 at 6008.383 kb on + strand, within PS417_27870 at 6008.384 kb on - strand, within PS417_27870 at 6008.526 kb on - strand, within PS417_27870 at 6008.831 kb on + strand at 6008.957 kb on - strand at 6008.978 kb on + strand at 6009.007 kb on + strand at 6009.038 kb on + strand at 6009.038 kb on + strand at 6009.039 kb on - strand at 6009.039 kb on - strand at 6009.039 kb on - strand at 6009.039 kb on - strand at 6009.052 kb on + strand at 6009.207 kb on + strand at 6009.208 kb on - strand at 6009.401 kb on + strand, within PS417_27875 at 6009.791 kb on + strand, within PS417_27875 at 6009.791 kb on + strand, within PS417_27875 at 6010.025 kb on + strand, within PS417_27875 at 6010.025 kb on + strand, within PS417_27875 at 6010.026 kb on - strand, within PS417_27875 at 6010.221 kb on + strand, within PS417_27875 at 6010.256 kb on + strand, within PS417_27875 at 6010.256 kb on + strand, within PS417_27875 at 6010.256 kb on + strand at 6010.257 kb on - strand, within PS417_27875 at 6010.257 kb on - strand, within PS417_27875 at 6010.257 kb on - strand, within PS417_27875 at 6010.257 kb on - strand, within PS417_27875 at 6010.412 kb on - strand at 6010.581 kb on + strand at 6010.582 kb on - strand at 6010.586 kb on + strand at 6010.587 kb on - strand at 6010.587 kb on - strand at 6010.590 kb on + strand at 6010.590 kb on + strand at 6010.591 kb on - strand at 6010.614 kb on + strand at 6010.984 kb on + strand at 6011.074 kb on + strand at 6011.074 kb on + strand at 6011.341 kb on - strand, within PS417_27885 at 6011.383 kb on + strand, within PS417_27885 at 6011.395 kb on + strand at 6011.395 kb on + strand, within PS417_27885 at 6011.395 kb on + strand, within PS417_27885
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 6,008,119 - PS417_27870 0.60 +0.4 6,008,321 - PS417_27870 0.70 +1.3 6,008,383 + PS417_27870 0.73 -2.2 6,008,384 - PS417_27870 0.73 -0.0 6,008,526 - PS417_27870 0.80 -0.7 6,008,831 + -1.2 6,008,957 - -0.2 6,008,978 + -1.2 6,009,007 + +0.7 6,009,038 + -0.9 6,009,038 + -1.2 6,009,039 - -0.3 6,009,039 - -1.4 6,009,039 - -2.1 6,009,039 - -1.8 6,009,052 + -0.0 6,009,207 + -1.9 6,009,208 - -4.2 6,009,401 + PS417_27875 0.24 -1.6 6,009,791 + PS417_27875 0.51 -0.8 6,009,791 + PS417_27875 0.51 -0.7 6,010,025 + PS417_27875 0.68 +0.3 6,010,025 + PS417_27875 0.68 -0.6 6,010,026 - PS417_27875 0.68 -1.7 6,010,221 + PS417_27875 0.82 -1.3 6,010,256 + PS417_27875 0.85 -1.6 6,010,256 + PS417_27875 0.85 -2.4 6,010,256 + -0.5 6,010,257 - PS417_27875 0.85 -2.0 6,010,257 - PS417_27875 0.85 +1.9 6,010,257 - PS417_27875 0.85 -0.4 6,010,257 - PS417_27875 0.85 -3.2 6,010,412 - -2.6 6,010,581 + -0.7 6,010,582 - +0.8 6,010,586 + +0.3 6,010,587 - -0.1 6,010,587 - +1.3 6,010,590 + +0.3 6,010,590 + -0.4 6,010,591 - -1.1 6,010,614 + +1.9 6,010,984 + -0.4 6,011,074 + +0.6 6,011,074 + -0.3 6,011,341 - PS417_27885 0.27 +2.3 6,011,383 + PS417_27885 0.32 -0.7 6,011,395 + +2.3 6,011,395 + PS417_27885 0.33 -0.7 6,011,395 + PS417_27885 0.33 +0.7
Or see this region's nucleotide sequence