Strain Fitness in Pseudomonas simiae WCS417 around PS417_27615

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
5,953,902	+		PS417_27605	0.88	+0.4
5,953,902	+		PS417_27605	0.88	+0.5
5,953,902	+		PS417_27605	0.88	-1.6
5,953,903	-		PS417_27605	0.88	-0.3
5,953,903	-		PS417_27605	0.88	+2.9
5,953,903	-		PS417_27605	0.88	-3.7
5,953,903	-		PS417_27605	0.88	-1.2
5,953,903	-		PS417_27605	0.88	-2.2
5,953,903	-		PS417_27605	0.88	-2.7
5,953,945	+				-2.3
5,953,945	+				-0.9
5,953,945	+				-1.1
5,953,946	-				-1.4
5,953,946	-				-3.1
5,953,971	+				-1.2
5,953,971	+				-0.5
5,953,971	+				-1.4
5,953,975	+				-2.3
5,953,975	+				-0.5
5,953,977	+				-1.8
5,953,977	+				-1.1
5,953,977	+				-1.4
5,954,045	+				+0.3
5,954,045	+				-1.3
5,954,045	+				+1.1
5,954,045	+				-0.9
5,954,045	+				-0.9
5,954,046	-				-2.3
5,954,079	+				+0.3
5,954,114	+		PS417_27610	0.16	+1.3
5,954,114	+		PS417_27610	0.16	-0.7
5,954,273	+		PS417_27610	0.54	-1.1
5,954,273	+		PS417_27610	0.54	+0.3
5,954,469	+				-1.8
5,954,469	+				-1.5
5,954,469	+				-0.0
5,954,469	+				-2.0
5,954,469	+				-1.3
5,954,469	+				+1.3
5,954,469	+				-1.5
5,954,469	+				-2.0
5,954,469	+				-1.6
5,954,469	+				-0.9
5,954,470	-				-0.2
5,954,530	+				+0.5
5,954,536	+				+0.7
5,954,536	+				+1.6
5,954,536	+				-0.5
5,954,536	+				-1.1
5,954,546	+				+0.2
5,954,547	-				-0.3
5,954,619	+				+2.7
5,954,678	+				-0.6
5,954,678	+				-0.6
5,954,678	+				-0.0
5,954,679	-				+0.0
5,954,679	-				-0.2
5,954,682	+				-1.6
5,954,682	+				-0.6
5,954,682	+				-1.0
5,954,682	+				+0.1
5,954,682	+				-0.7
5,954,683	-				+0.9
5,954,683	-				-0.3
5,954,790	+				-0.3
5,954,790	+				-0.9
5,954,791	-				-0.7
5,954,808	+				-1.7
5,954,808	+				-0.9
5,954,809	-				-0.8
5,954,809	-				-0.7
5,955,184	+		PS417_27615	0.38	+0.8
5,955,297	+		PS417_27615	0.46	+0.4
5,955,341	-		PS417_27615	0.49	-1.4
5,955,341	-		PS417_27615	0.49	-1.7
5,955,341	-		PS417_27615	0.49	-0.3
5,955,392	-		PS417_27615	0.53	-1.6
5,955,483	+		PS417_27615	0.60	-0.3
5,955,535	+		PS417_27615	0.64	-0.4
5,955,535	+		PS417_27615	0.64	+2.3
5,955,536	-		PS417_27615	0.64	+0.2
5,955,747	+		PS417_27615	0.80	-1.5
5,955,753	+		PS417_27615	0.80	-1.2
5,955,754	-		PS417_27615	0.80	-1.4
5,955,755	+		PS417_27615	0.80	-0.4
5,955,755	+		PS417_27615	0.80	+2.0
5,955,755	+		PS417_27615	0.80	+0.7
5,955,818	-				+0.3
5,955,843	+		PS417_27615	0.87	-0.3
5,955,844	-		PS417_27615	0.87	-0.3
5,955,971	+				+0.3
5,955,971	+				-1.4
5,955,972	-				+0.1
5,956,007	-				-1.0
5,956,018	+				-0.4
5,956,019	-				+0.1
5,956,762	+				+0.6
5,956,763	-				-0.5
5,956,764	+				-2.2
5,956,764	+				-0.4
5,956,764	+				+0.0
5,956,778	+				+0.9
5,956,778	+				-0.3
5,956,779	-				-1.2
5,956,779	-				-0.9