Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02610 and PS417_02615 overlap by 1 nucleotides PS417_02615 and PS417_02620 are separated by 46 nucleotides PS417_02620 and PS417_02625 are separated by 332 nucleotides PS417_02625 and PS417_02630 are separated by 136 nucleotides
PS417_02610: PS417_02610 - hypothetical protein, at 596,757 to 599,243
_02610
PS417_02615: PS417_02615 - transglutaminase, at 599,243 to 600,133
_02615
PS417_02620: PS417_02620 - hypothetical protein, at 600,180 to 600,362
_02620
PS417_02625: PS417_02625 - azurin, at 600,695 to 601,141
_02625
PS417_02630: PS417_02630 - NAD synthetase, at 601,278 to 602,105
_02630
Position (kb)
600
601 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 599.285 kb on + strand at 599.286 kb on - strand at 599.286 kb on - strand at 599.428 kb on + strand at 599.497 kb on - strand, within PS417_02615 at 599.579 kb on - strand, within PS417_02615 at 599.628 kb on - strand, within PS417_02615 at 599.704 kb on - strand, within PS417_02615 at 599.867 kb on + strand, within PS417_02615 at 599.867 kb on + strand at 599.868 kb on - strand, within PS417_02615 at 599.868 kb on - strand, within PS417_02615 at 599.869 kb on + strand, within PS417_02615 at 599.870 kb on - strand, within PS417_02615 at 600.072 kb on + strand at 600.347 kb on - strand at 600.347 kb on - strand at 600.350 kb on + strand at 600.350 kb on + strand at 600.351 kb on - strand at 600.351 kb on - strand at 600.375 kb on - strand at 600.424 kb on + strand at 600.467 kb on - strand at 600.539 kb on + strand at 600.553 kb on + strand at 600.554 kb on - strand at 600.554 kb on - strand at 600.554 kb on - strand at 600.565 kb on + strand at 600.565 kb on + strand at 600.566 kb on - strand at 600.566 kb on - strand at 600.625 kb on - strand at 601.077 kb on - strand at 601.139 kb on + strand at 601.139 kb on + strand at 601.140 kb on - strand at 601.334 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 599,285 + -0.3 599,286 - -0.4 599,286 - -0.0 599,428 + +3.3 599,497 - PS417_02615 0.29 +1.2 599,579 - PS417_02615 0.38 -1.9 599,628 - PS417_02615 0.43 -0.6 599,704 - PS417_02615 0.52 +1.2 599,867 + PS417_02615 0.70 +0.9 599,867 + +1.3 599,868 - PS417_02615 0.70 -0.3 599,868 - PS417_02615 0.70 -0.6 599,869 + PS417_02615 0.70 +2.3 599,870 - PS417_02615 0.70 -1.9 600,072 + -0.1 600,347 - +0.1 600,347 - +0.7 600,350 + -1.0 600,350 + +1.3 600,351 - +0.2 600,351 - -0.1 600,375 - +0.3 600,424 + +0.1 600,467 - -1.1 600,539 + +0.2 600,553 + -0.2 600,554 - -0.2 600,554 - +0.3 600,554 - +1.3 600,565 + +0.1 600,565 + +0.2 600,566 - -0.0 600,566 - -0.1 600,625 - -2.2 601,077 - -0.0 601,139 + -0.9 601,139 + -2.4 601,140 - -0.8 601,334 + -1.2
Or see this region's nucleotide sequence