Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22465 and PS417_22470 are separated by 107 nucleotides PS417_22470 and PS417_22475 are separated by 168 nucleotides PS417_22475 and PS417_22480 are separated by 180 nucleotides
PS417_22465: PS417_22465 - aspartyl-tRNA synthetase, at 4,864,017 to 4,865,792
_22465
PS417_22470: PS417_22470 - FmdB family transcriptional regulator, at 4,865,900 to 4,866,121
_22470
PS417_22475: PS417_22475 - hypothetical protein, at 4,866,290 to 4,866,622
_22475
PS417_22480: PS417_22480 - ferritin, at 4,866,803 to 4,867,276
_22480
Position (kb)
4865
4866
4867 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4865.850 kb on - strand at 4865.850 kb on - strand at 4865.850 kb on - strand at 4865.855 kb on - strand at 4865.855 kb on - strand at 4865.855 kb on - strand at 4866.105 kb on + strand at 4866.105 kb on + strand at 4866.106 kb on - strand at 4866.106 kb on - strand at 4866.106 kb on - strand at 4866.111 kb on + strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.112 kb on - strand at 4866.203 kb on - strand at 4866.203 kb on - strand at 4866.203 kb on - strand at 4866.205 kb on - strand at 4866.399 kb on + strand, within PS417_22475 at 4866.400 kb on - strand, within PS417_22475 at 4866.400 kb on - strand, within PS417_22475 at 4866.455 kb on - strand, within PS417_22475 at 4866.455 kb on - strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.462 kb on + strand, within PS417_22475 at 4866.569 kb on + strand, within PS417_22475 at 4866.569 kb on + strand, within PS417_22475 at 4866.570 kb on - strand, within PS417_22475 at 4866.575 kb on - strand, within PS417_22475 at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.622 kb on + strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.623 kb on - strand at 4866.734 kb on + strand at 4866.956 kb on + strand, within PS417_22480 at 4866.957 kb on - strand, within PS417_22480 at 4866.957 kb on - strand, within PS417_22480 at 4867.026 kb on + strand, within PS417_22480 at 4867.027 kb on - strand, within PS417_22480 at 4867.035 kb on + strand, within PS417_22480 at 4867.036 kb on - strand, within PS417_22480 at 4867.036 kb on - strand, within PS417_22480 at 4867.110 kb on + strand, within PS417_22480 at 4867.111 kb on - strand, within PS417_22480
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 4,865,850 - +0.6 4,865,850 - -0.2 4,865,850 - +2.8 4,865,855 - +1.9 4,865,855 - -2.3 4,865,855 - -1.6 4,866,105 + -0.1 4,866,105 + -1.2 4,866,106 - +1.2 4,866,106 - +0.6 4,866,106 - -0.4 4,866,111 + +0.1 4,866,112 - -0.5 4,866,112 - +0.5 4,866,112 - -0.0 4,866,112 - +0.1 4,866,112 - -2.2 4,866,112 - +0.4 4,866,203 - -0.9 4,866,203 - -0.1 4,866,203 - -0.1 4,866,205 - -1.3 4,866,399 + PS417_22475 0.33 -0.7 4,866,400 - PS417_22475 0.33 +0.4 4,866,400 - PS417_22475 0.33 -0.3 4,866,455 - PS417_22475 0.50 -0.5 4,866,455 - PS417_22475 0.50 +0.6 4,866,462 + PS417_22475 0.52 +0.1 4,866,462 + PS417_22475 0.52 -1.3 4,866,462 + PS417_22475 0.52 -0.4 4,866,569 + PS417_22475 0.84 -0.1 4,866,569 + PS417_22475 0.84 -0.8 4,866,570 - PS417_22475 0.84 -0.2 4,866,575 - PS417_22475 0.86 +0.4 4,866,622 + -0.4 4,866,622 + +1.4 4,866,622 + +0.9 4,866,622 + +2.4 4,866,622 + -2.1 4,866,622 + +2.4 4,866,623 - -0.7 4,866,623 - -1.9 4,866,623 - -0.7 4,866,623 - -1.9 4,866,623 - +0.1 4,866,623 - +2.4 4,866,623 - -0.9 4,866,623 - -1.6 4,866,623 - -1.9 4,866,734 + +0.0 4,866,956 + PS417_22480 0.32 -0.5 4,866,957 - PS417_22480 0.32 -0.0 4,866,957 - PS417_22480 0.32 +0.8 4,867,026 + PS417_22480 0.47 +0.7 4,867,027 - PS417_22480 0.47 +0.6 4,867,035 + PS417_22480 0.49 -0.5 4,867,036 - PS417_22480 0.49 +0.4 4,867,036 - PS417_22480 0.49 -1.0 4,867,110 + PS417_22480 0.65 -0.6 4,867,111 - PS417_22480 0.65 -0.8
Or see this region's nucleotide sequence