Strain Fitness in Pseudomonas simiae WCS417 around PS417_22320

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,833,053	+				+0.8
4,833,099	-				-0.1
4,833,246	-		PS417_22315	0.22	-1.3
4,833,246	-		PS417_22315	0.22	+0.4
4,833,246	-		PS417_22315	0.22	+0.8
4,833,246	-		PS417_22315	0.22	-0.2
4,833,493	+		PS417_22315	0.51	-0.9
4,833,906	-				+0.1
4,833,937	+				-0.8
4,833,937	+				+3.9
4,833,937	+				+0.1
4,833,937	+				-0.0
4,833,937	+				-0.4
4,833,938	-				+0.2
4,833,938	-				+2.4
4,834,063	+		PS417_22320	0.10	-0.4
4,834,063	+		PS417_22320	0.10	-1.3
4,834,064	-		PS417_22320	0.10	+1.0
4,834,064	-		PS417_22320	0.10	+1.4
4,834,064	-		PS417_22320	0.10	+2.4
4,834,064	-		PS417_22320	0.10	-0.2
4,834,064	-		PS417_22320	0.10	-0.1
4,834,064	-		PS417_22320	0.10	-0.5
4,834,064	-		PS417_22320	0.10	-1.8
4,834,064	-		PS417_22320	0.10	+0.4
4,834,088	-		PS417_22320	0.12	+0.5
4,834,279	+		PS417_22320	0.25	+2.4
4,834,280	-		PS417_22320	0.26	+0.6
4,834,684	+		PS417_22320	0.54	+1.0
4,834,685	-		PS417_22320	0.54	+1.8
4,834,838	+		PS417_22320	0.65	+1.5
4,834,839	-		PS417_22320	0.65	-0.1
4,835,029	+		PS417_22320	0.78	+1.4
4,835,029	+		PS417_22320	0.78	-0.0
4,835,089	+		PS417_22320	0.82	+2.4
4,835,090	-		PS417_22320	0.82	-0.4
4,835,090	-		PS417_22320	0.82	+0.6
4,835,113	+		PS417_22320	0.84	+0.3
4,835,113	+		PS417_22320	0.84	-1.2
4,835,114	-		PS417_22320	0.84	+0.0
4,835,114	-		PS417_22320	0.84	-1.2
4,835,114	-		PS417_22320	0.84	-2.6
4,835,114	-		PS417_22320	0.84	+0.1
4,835,119	+		PS417_22320	0.84	+1.0
4,835,120	-				-0.4
4,835,120	-		PS417_22320	0.84	+0.1
4,835,120	-		PS417_22320	0.84	-0.0
4,835,120	-		PS417_22320	0.84	+1.2
4,835,120	-		PS417_22320	0.84	-0.8
4,835,360	+				-0.2
4,835,481	-				+0.0
4,835,510	+				-0.8
4,835,511	-				+0.8
4,835,525	+				-1.0
4,835,597	+				+0.7
4,835,598	-				+5.4
4,835,598	-				-1.4
4,835,603	+				-1.2
4,835,604	-				-0.4
4,835,604	-				+0.3
4,835,682	+				-0.2
4,835,683	-				+1.7
4,835,820	+				-0.5
4,835,821	-				+0.3
4,835,888	-				-0.8
4,835,888	-				-1.7
4,836,014	+		PS417_22325	0.16	-0.5
4,836,014	+		PS417_22325	0.16	-0.5
4,836,014	+		PS417_22325	0.16	-0.2
4,836,020	+		PS417_22325	0.16	+0.6
4,836,021	-		PS417_22325	0.16	+0.4
4,836,044	+		PS417_22325	0.18	+0.4
4,836,045	-		PS417_22325	0.18	+0.8
4,836,045	-		PS417_22325	0.18	-0.4
4,836,045	-		PS417_22325	0.18	+0.4
4,836,104	+		PS417_22325	0.22	-2.3