Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21660 and PS417_21665 are separated by 146 nucleotides PS417_21665 and PS417_21670 are separated by 455 nucleotides
PS417_21660: PS417_21660 - alanyl-tRNA synthetase, at 4,696,388 to 4,699,006
_21660
PS417_21665: PS417_21665 - threonine aldolase, at 4,699,153 to 4,700,157
_21665
PS417_21670: PS417_21670 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,700,613 to 4,701,119
_21670
Position (kb) 4699
4700
4701 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4699.084 kb on - strand at 4699.106 kb on - strand at 4699.106 kb on - strand at 4699.119 kb on - strand at 4699.317 kb on - strand, within PS417_21665 at 4699.317 kb on - strand, within PS417_21665 at 4699.317 kb on - strand, within PS417_21665 at 4699.433 kb on + strand, within PS417_21665 at 4699.434 kb on - strand, within PS417_21665 at 4699.434 kb on - strand, within PS417_21665 at 4699.434 kb on - strand, within PS417_21665 at 4699.640 kb on + strand, within PS417_21665 at 4699.723 kb on + strand, within PS417_21665 at 4699.892 kb on + strand, within PS417_21665 at 4699.893 kb on - strand, within PS417_21665 at 4699.898 kb on + strand, within PS417_21665 at 4699.898 kb on + strand, within PS417_21665 at 4699.899 kb on - strand, within PS417_21665 at 4699.899 kb on - strand, within PS417_21665 at 4699.903 kb on - strand, within PS417_21665 at 4699.926 kb on - strand, within PS417_21665 at 4700.064 kb on - strand at 4700.191 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.402 kb on + strand at 4700.402 kb on + strand at 4700.403 kb on - strand at 4700.403 kb on - strand at 4700.492 kb on + strand at 4700.492 kb on + strand at 4700.492 kb on + strand at 4700.525 kb on + strand at 4700.525 kb on + strand at 4700.525 kb on + strand at 4700.526 kb on - strand at 4700.526 kb on - strand at 4700.526 kb on - strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.541 kb on - strand at 4700.541 kb on - strand at 4700.541 kb on - strand at 4700.559 kb on + strand at 4700.880 kb on + strand, within PS417_21670 at 4700.881 kb on - strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.054 kb on - strand, within PS417_21670
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 4,699,084 - -0.3 4,699,106 - +1.6 4,699,106 - +0.5 4,699,119 - -0.4 4,699,317 - PS417_21665 0.16 -0.4 4,699,317 - PS417_21665 0.16 -0.8 4,699,317 - PS417_21665 0.16 +0.3 4,699,433 + PS417_21665 0.28 +0.2 4,699,434 - PS417_21665 0.28 +0.3 4,699,434 - PS417_21665 0.28 +0.2 4,699,434 - PS417_21665 0.28 +1.1 4,699,640 + PS417_21665 0.48 -1.2 4,699,723 + PS417_21665 0.57 +0.6 4,699,892 + PS417_21665 0.74 -0.1 4,699,893 - PS417_21665 0.74 +0.1 4,699,898 + PS417_21665 0.74 +0.3 4,699,898 + PS417_21665 0.74 -0.2 4,699,899 - PS417_21665 0.74 -1.0 4,699,899 - PS417_21665 0.74 +0.8 4,699,903 - PS417_21665 0.75 +0.4 4,699,926 - PS417_21665 0.77 +0.5 4,700,064 - +0.9 4,700,191 + +0.8 4,700,272 + +3.0 4,700,272 + -0.9 4,700,272 + +0.1 4,700,272 + +0.7 4,700,402 + -1.1 4,700,402 + -0.3 4,700,403 - +1.4 4,700,403 - -1.6 4,700,492 + +0.8 4,700,492 + +0.3 4,700,492 + -0.2 4,700,525 + +1.4 4,700,525 + -0.0 4,700,525 + +0.5 4,700,526 - +0.9 4,700,526 - +1.3 4,700,526 - -2.5 4,700,540 + -1.0 4,700,540 + -0.9 4,700,540 + -0.7 4,700,540 + -0.1 4,700,541 - +1.9 4,700,541 - -1.3 4,700,541 - +0.4 4,700,559 + +1.0 4,700,880 + PS417_21670 0.53 -1.6 4,700,881 - PS417_21670 0.53 +0.7 4,701,053 + PS417_21670 0.87 +0.9 4,701,053 + PS417_21670 0.87 +1.6 4,701,053 + PS417_21670 0.87 +1.8 4,701,053 + PS417_21670 0.87 +0.2 4,701,054 - PS417_21670 0.87 +1.1
Or see this region's nucleotide sequence