Strain Fitness in Pseudomonas simiae WCS417 around PS417_20895

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,542,345	+		PS417_20890	0.70	-3.5
4,542,474	+		PS417_20890	0.76	-3.1
4,542,492	+		PS417_20890	0.77	-2.9
4,542,495	+		PS417_20890	0.77	-2.2
4,542,495	+		PS417_20890	0.77	+0.7
4,542,495	+		PS417_20890	0.77	-1.4
4,542,528	+		PS417_20890	0.78	-2.6
4,542,528	+		PS417_20890	0.78	-5.1
4,542,529	-		PS417_20890	0.78	-2.4
4,542,529	-		PS417_20890	0.78	+0.0
4,542,531	+		PS417_20890	0.78	-1.1
4,542,588	+		PS417_20890	0.81	-1.9
4,542,756	+		PS417_20890	0.88	-3.3
4,542,756	+		PS417_20890	0.88	-2.4
4,542,757	-		PS417_20890	0.88	-0.9
4,542,757	-		PS417_20890	0.88	-1.5
4,543,344	+		PS417_20895	0.20	+2.3
4,543,345	-		PS417_20895	0.20	-2.4
4,543,345	-		PS417_20895	0.20	-2.5
4,543,604	+		PS417_20895	0.51	-1.8
4,543,604	+				+2.3
4,543,604	+		PS417_20895	0.51	-3.0
4,543,604	+		PS417_20895	0.51	-2.2
4,543,604	+		PS417_20895	0.51	-1.8
4,543,604	+		PS417_20895	0.51	-1.5
4,543,604	+		PS417_20895	0.51	-2.5
4,543,605	-		PS417_20895	0.51	-0.8
4,543,605	-		PS417_20895	0.51	-0.2
4,543,605	-		PS417_20895	0.51	-2.4
4,543,605	-		PS417_20895	0.51	-3.8
4,543,605	-		PS417_20895	0.51	-0.9
4,543,605	-		PS417_20895	0.51	+0.0
4,543,605	-		PS417_20895	0.51	-2.1
4,543,605	-		PS417_20895	0.51	+1.3
4,543,605	-		PS417_20895	0.51	-1.8
4,543,605	-		PS417_20895	0.51	-0.5
4,543,605	-		PS417_20895	0.51	-3.6
4,543,605	-		PS417_20895	0.51	-2.3
4,543,605	-		PS417_20895	0.51	-3.9
4,543,605	-		PS417_20895	0.51	-3.3
4,543,606	+		PS417_20895	0.51	-1.9
4,543,606	+		PS417_20895	0.51	-1.7
4,543,607	-		PS417_20895	0.51	-1.8
4,543,607	-		PS417_20895	0.51	-1.3
4,543,677	+		PS417_20895	0.59	-3.1
4,543,932	+		PS417_20895	0.90	-0.9
4,543,932	+		PS417_20895	0.90	+0.0
4,543,932	+		PS417_20895	0.90	-0.7
4,543,932	+		PS417_20895	0.90	-2.8
4,543,933	-		PS417_20895	0.90	-3.5
4,543,935	-				-1.0
4,544,112	+				-0.8
4,544,113	-				+0.0
4,544,113	-				+0.3
4,544,113	-				-0.5
4,544,113	-				+0.2
4,544,118	+				+1.5
4,544,118	+				+1.3
4,544,118	+				+0.7
4,544,118	+				-0.8
4,544,119	-				+0.7
4,544,119	-				-0.5
4,544,224	-		PS417_20900	0.15	+0.2
4,544,331	+		PS417_20900	0.23	-1.7
4,544,331	+		PS417_20900	0.23	-1.8
4,544,331	+		PS417_20900	0.23	-0.8
4,544,331	+		PS417_20900	0.23	-0.2
4,544,331	+		PS417_20900	0.23	+0.9
4,544,332	-		PS417_20900	0.23	+3.9
4,544,332	-		PS417_20900	0.23	-0.6
4,544,332	-		PS417_20900	0.23	-0.5
4,544,547	+		PS417_20900	0.40	+0.9
4,544,548	-		PS417_20900	0.40	-0.7
4,544,715	+		PS417_20900	0.52	-0.2
4,544,716	-		PS417_20900	0.52	-0.3
4,544,716	-		PS417_20900	0.52	+0.2
4,544,802	+		PS417_20900	0.59	-0.1
4,544,802	+		PS417_20900	0.59	-0.1
4,544,802	+		PS417_20900	0.59	+2.1
4,544,803	-		PS417_20900	0.59	-0.1
4,544,803	-		PS417_20900	0.59	+3.1
4,544,803	-				+0.3
4,544,803	-		PS417_20900	0.59	+0.7
4,544,803	-		PS417_20900	0.59	-0.8
4,544,803	-		PS417_20900	0.59	+1.1
4,544,803	-		PS417_20900	0.59	-1.8