Strain Fitness in Pseudomonas simiae WCS417 around PS417_20145

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,370,562	-				-0.3
4,370,580	-				-0.4
4,370,642	+				-1.3
4,370,642	+				+0.5
4,370,670	+		PS417_20135	0.19	-0.7
4,370,670	+				+1.7
4,370,670	+		PS417_20135	0.19	+0.3
4,370,670	+		PS417_20135	0.19	-0.3
4,370,671	-		PS417_20135	0.19	-0.8
4,370,671	-		PS417_20135	0.19	-0.5
4,370,671	-		PS417_20135	0.19	-2.7
4,370,671	-				+2.3
4,370,671	-		PS417_20135	0.19	+1.1
4,370,714	+		PS417_20135	0.42	+0.2
4,370,715	-		PS417_20135	0.42	-0.8
4,370,715	-		PS417_20135	0.42	+2.3
4,370,766	+		PS417_20135	0.69	-1.0
4,370,770	+		PS417_20135	0.71	+0.1
4,370,938	+				-0.2
4,370,938	+				+1.2
4,370,938	+				+2.9
4,370,938	+				+1.1
4,370,938	+				-0.1
4,370,939	-				-1.1
4,370,966	+				+0.4
4,371,218	+		PS417_20140	0.46	-1.7
4,371,219	-		PS417_20140	0.47	-0.2
4,371,518	-				-0.3
4,371,525	+				-1.2
4,371,525	+				+1.0
4,371,617	+				-2.3
4,371,890	+		PS417_20145	0.42	-0.4
4,371,891	-		PS417_20145	0.43	+0.2
4,372,053	+		PS417_20145	0.62	+0.6
4,372,053	+		PS417_20145	0.62	-0.8
4,372,105	+		PS417_20145	0.68	+1.5
4,372,105	+		PS417_20145	0.68	-0.7
4,372,105	+		PS417_20145	0.68	+3.5
4,372,106	-		PS417_20145	0.68	+1.0
4,372,165	-		PS417_20145	0.75	+0.7
4,372,165	-				+2.3
4,372,167	+		PS417_20145	0.76	-1.0
4,372,167	+		PS417_20145	0.76	+3.3
4,372,168	-		PS417_20145	0.76	-1.0
4,372,284	+		PS417_20145	0.90	+1.3
4,372,284	+				-1.0
4,372,365	+				-0.9
4,372,365	+				+0.2
4,372,365	+				-0.2
4,372,365	+				-2.7
4,372,365	+				+1.0
4,372,366	-				-1.0
4,372,366	-				-0.1
4,372,375	+				+1.7
4,372,375	+				+0.6
4,372,389	+				-1.6
4,372,389	+				-0.5
4,372,389	+				-0.0