Strain Fitness in Pseudomonas simiae WCS417 around PS417_19940

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,327,386	+				+0.2
4,327,389	-				-1.3
4,327,393	+				-0.0
4,327,393	+				+0.6
4,327,414	-				-2.1
4,327,512	+				-1.5
4,327,513	-				+0.2
4,327,513	-				-0.2
4,327,632	-		PS417_19930	0.41	+0.2
4,327,719	+		PS417_19930	0.72	-0.7
4,327,720	-		PS417_19930	0.72	-3.4
4,327,720	-		PS417_19930	0.72	-0.8
4,327,847	+				-0.6
4,327,893	+				+2.3
4,327,941	-		PS417_19935	0.35	-0.7
4,328,034	-		PS417_19935	0.68	-0.5
4,328,092	+		PS417_19935	0.88	+0.7
4,328,093	-		PS417_19935	0.88	-0.8
4,328,093	-		PS417_19935	0.88	-1.7
4,328,126	+				-1.4
4,328,126	+				-0.7
4,328,173	-				-1.6
4,328,174	+				+0.3
4,328,174	+				+0.7
4,328,175	-				+0.2
4,328,200	-				-0.8
4,328,672	+		PS417_19940	0.21	+0.2
4,328,672	+		PS417_19940	0.21	-1.4
4,328,672	+		PS417_19940	0.21	-1.8
4,328,673	-		PS417_19940	0.21	-1.5
4,328,768	-		PS417_19940	0.25	+0.2
4,328,960	-		PS417_19940	0.34	+0.8
4,329,273	+		PS417_19940	0.48	-0.2
4,329,273	+		PS417_19940	0.48	+0.1
4,329,273	+		PS417_19940	0.48	-2.5
4,329,274	-		PS417_19940	0.49	-0.9
4,329,351	+		PS417_19940	0.52	-0.5
4,329,524	+		PS417_19940	0.60	-0.4
4,329,585	+		PS417_19940	0.63	-1.4
4,329,639	+		PS417_19940	0.65	-0.1
4,329,639	+		PS417_19940	0.65	-0.4
4,329,641	+		PS417_19940	0.65	-0.8
4,329,642	-		PS417_19940	0.65	-0.1
4,329,832	+		PS417_19940	0.74	-0.4
4,329,833	-		PS417_19940	0.74	-1.2
4,329,852	+		PS417_19940	0.75	+0.1
4,329,853	-		PS417_19940	0.75	-0.1
4,329,853	-				+2.3
4,329,853	-		PS417_19940	0.75	-1.2
4,329,864	+		PS417_19940	0.75	-2.2
4,329,865	-		PS417_19940	0.76	-0.9
4,329,891	+		PS417_19940	0.77	+0.0
4,329,892	-		PS417_19940	0.77	+0.5
4,329,892	-		PS417_19940	0.77	-0.2
4,330,164	+		PS417_19940	0.89	+1.9
4,330,167	+		PS417_19940	0.89	-1.1
4,330,215	+				-0.6
4,330,215	+				-1.2
4,330,216	-				-0.3
4,330,219	+				+0.6
4,330,279	-				+0.2
4,330,280	+				-1.6
4,330,280	+				+0.1
4,330,280	+				+0.3
4,330,280	+				-0.9
4,330,280	+				-1.4
4,330,281	-				+0.3
4,330,314	-				-0.7
4,330,342	-				-1.6
4,330,398	+				-0.2
4,330,398	+				+0.9
4,330,617	+		PS417_19945	0.36	-0.5
4,330,618	-		PS417_19945	0.36	+0.5
4,330,618	-		PS417_19945	0.36	+1.1
4,330,618	-		PS417_19945	0.36	+0.7
4,330,618	-		PS417_19945	0.36	-0.2
4,330,712	-		PS417_19945	0.57	-0.4
4,330,938	+				+0.3
4,330,938	+				-0.6
4,330,949	+				-0.9
4,330,987	-				-0.3
4,330,987	-				+2.0
4,331,020	-				+1.5