Strain Fitness in Pseudomonas simiae WCS417 around PS417_19400

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
4,202,906	+		PS417_19395	0.28	-3.6
4,202,907	-		PS417_19395	0.28	+2.3
4,203,151	-		PS417_19395	0.46	-4.1
4,203,151	-		PS417_19395	0.46	-2.5
4,203,228	+		PS417_19395	0.51	+1.1
4,203,228	+		PS417_19395	0.51	-1.5
4,203,228	+		PS417_19395	0.51	-2.0
4,203,228	+		PS417_19395	0.51	-2.1
4,203,228	+		PS417_19395	0.51	-0.0
4,203,229	-		PS417_19395	0.52	-0.5
4,203,229	-		PS417_19395	0.52	-0.5
4,203,229	-		PS417_19395	0.52	+0.3
4,203,498	+		PS417_19395	0.71	-1.7
4,203,618	+		PS417_19395	0.80	-1.8
4,203,643	-		PS417_19395	0.82	-2.2
4,203,643	-		PS417_19395	0.82	-1.5
4,203,677	+		PS417_19395	0.85	-2.9
4,203,728	+		PS417_19395	0.89	-1.7
4,203,729	-		PS417_19395	0.89	-3.5
4,203,776	+				-1.5
4,203,776	+				-2.4
4,203,783	+				-0.8
4,203,783	+				-1.5
4,203,783	+				-0.5
4,203,783	+				+0.7
4,203,783	+				-1.8
4,203,784	-				-1.1
4,203,784	-				-0.0
4,203,784	-				+0.3
4,203,784	-				-2.8
4,203,784	-				-0.5
4,203,814	-				-0.5
4,203,871	+				+1.3
4,203,872	-				-1.5
4,203,878	-				-0.0
4,203,994	+		PS417_19400	0.16	-1.2
4,203,994	+		PS417_19400	0.16	-0.8
4,203,995	-		PS417_19400	0.16	-2.0
4,203,995	-		PS417_19400	0.16	+0.7
4,203,995	-				-0.5
4,204,138	+		PS417_19400	0.38	-0.0
4,204,138	+		PS417_19400	0.38	-2.3
4,204,139	-		PS417_19400	0.38	-1.7
4,204,256	+		PS417_19400	0.57	-0.8
4,204,571	-				+0.3
4,204,571	-				+2.0
4,204,714	+				+0.7
4,204,714	+				-1.0
4,204,715	-				-0.3
4,204,715	-				-0.4
4,204,722	+				+0.8
4,204,740	-				+2.3
4,204,743	+				+0.4
4,204,744	-				+0.7
4,204,747	-				-1.2
4,204,793	+				-0.0
4,204,794	-				-0.7
4,204,794	-				-0.6
4,204,794	-				-0.5
4,204,794	-				-0.1
4,204,799	+				-1.3
4,204,799	+				+0.5
4,204,800	-				-0.5
4,204,814	+				+0.7
4,204,814	+				+1.6
4,204,815	-				-0.9
4,204,815	-				-0.4
4,204,815	-				-0.6
4,204,987	+				+0.3
4,204,992	+				+1.2
4,204,992	+				-0.0
4,204,992	+				+1.4
4,204,992	+				+0.1
4,204,993	-				+2.3
4,204,993	-				-0.4
4,204,993	-				+0.3
4,204,993	-				+0.4
4,204,993	-				-0.4
4,204,993	-				-1.4
4,204,993	-				-0.7
4,204,993	-				+0.7
4,204,993	-				+0.7
4,205,272	+		PS417_19405	0.14	+0.7
4,205,273	-		PS417_19405	0.14	+0.3
4,205,301	-		PS417_19405	0.15	+0.4
4,205,418	+		PS417_19405	0.17	-1.2
4,205,418	+		PS417_19405	0.17	-0.8
4,205,418	+		PS417_19405	0.17	-2.0
4,205,421	+		PS417_19405	0.17	+0.5
4,205,475	+				+2.7
4,205,475	+		PS417_19405	0.18	-0.0
4,205,476	-		PS417_19405	0.18	-0.2