Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19025 and PS417_19030 are separated by 95 nucleotides PS417_19030 and PS417_19035 are separated by 52 nucleotides PS417_19035 and PS417_19040 are separated by 115 nucleotides
PS417_19025: PS417_19025 - aspartate aminotransferase, at 4,116,846 to 4,118,051
_19025
PS417_19030: PS417_19030 - sodium:dicarboxylate symporter, at 4,118,147 to 4,119,424
_19030
PS417_19035: PS417_19035 - heat-shock protein, at 4,119,477 to 4,119,935
_19035
PS417_19040: PS417_19040 - aspartate racemase, at 4,120,051 to 4,121,502
_19040
Position (kb)
4118
4119
4120 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4117.161 kb on + strand, within PS417_19025 at 4117.161 kb on + strand, within PS417_19025 at 4117.161 kb on + strand, within PS417_19025 at 4117.162 kb on - strand, within PS417_19025 at 4117.162 kb on - strand, within PS417_19025 at 4117.162 kb on - strand, within PS417_19025 at 4117.162 kb on - strand, within PS417_19025 at 4117.162 kb on - strand, within PS417_19025 at 4117.390 kb on - strand at 4117.426 kb on + strand, within PS417_19025 at 4117.427 kb on - strand, within PS417_19025 at 4117.467 kb on + strand at 4117.569 kb on + strand, within PS417_19025 at 4117.655 kb on + strand, within PS417_19025 at 4117.655 kb on + strand, within PS417_19025 at 4117.701 kb on - strand, within PS417_19025 at 4117.741 kb on - strand, within PS417_19025 at 4117.821 kb on + strand, within PS417_19025 at 4117.821 kb on + strand, within PS417_19025 at 4117.822 kb on - strand, within PS417_19025 at 4117.822 kb on - strand, within PS417_19025 at 4117.822 kb on - strand, within PS417_19025 at 4117.822 kb on - strand, within PS417_19025 at 4117.905 kb on + strand, within PS417_19025 at 4118.103 kb on - strand at 4118.147 kb on - strand at 4118.285 kb on - strand, within PS417_19030 at 4118.843 kb on + strand, within PS417_19030 at 4118.843 kb on + strand, within PS417_19030 at 4118.844 kb on - strand, within PS417_19030 at 4118.844 kb on - strand, within PS417_19030 at 4118.866 kb on - strand at 4119.011 kb on + strand, within PS417_19030 at 4119.012 kb on - strand, within PS417_19030 at 4119.464 kb on + strand at 4119.926 kb on + strand at 4119.929 kb on + strand at 4119.930 kb on - strand at 4120.003 kb on + strand at 4120.004 kb on - strand at 4120.007 kb on + strand at 4120.065 kb on - strand at 4120.065 kb on - strand at 4120.093 kb on - strand at 4120.185 kb on + strand at 4120.299 kb on - strand, within PS417_19040
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 4,117,161 + PS417_19025 0.26 -0.3 4,117,161 + PS417_19025 0.26 -1.6 4,117,161 + PS417_19025 0.26 -0.9 4,117,162 - PS417_19025 0.26 +0.9 4,117,162 - PS417_19025 0.26 -0.3 4,117,162 - PS417_19025 0.26 -0.6 4,117,162 - PS417_19025 0.26 -0.6 4,117,162 - PS417_19025 0.26 +1.2 4,117,390 - +0.7 4,117,426 + PS417_19025 0.48 -1.3 4,117,427 - PS417_19025 0.48 -0.5 4,117,467 + +2.3 4,117,569 + PS417_19025 0.60 -0.2 4,117,655 + PS417_19025 0.67 -0.8 4,117,655 + PS417_19025 0.67 -0.2 4,117,701 - PS417_19025 0.71 +1.3 4,117,741 - PS417_19025 0.74 -0.9 4,117,821 + PS417_19025 0.81 -1.4 4,117,821 + PS417_19025 0.81 -0.5 4,117,822 - PS417_19025 0.81 +0.1 4,117,822 - PS417_19025 0.81 -0.2 4,117,822 - PS417_19025 0.81 +0.5 4,117,822 - PS417_19025 0.81 -0.3 4,117,905 + PS417_19025 0.88 +0.8 4,118,103 - +0.7 4,118,147 - +0.0 4,118,285 - PS417_19030 0.11 +0.5 4,118,843 + PS417_19030 0.54 +0.4 4,118,843 + PS417_19030 0.54 -0.5 4,118,844 - PS417_19030 0.55 +1.8 4,118,844 - PS417_19030 0.55 +2.4 4,118,866 - +0.3 4,119,011 + PS417_19030 0.68 -2.2 4,119,012 - PS417_19030 0.68 +1.7 4,119,464 + -1.0 4,119,926 + -0.5 4,119,929 + -0.2 4,119,930 - +0.4 4,120,003 + +3.9 4,120,004 - -0.3 4,120,007 + -0.8 4,120,065 - +1.0 4,120,065 - +0.2 4,120,093 - -0.8 4,120,185 + -0.4 4,120,299 - PS417_19040 0.17 +0.5
Or see this region's nucleotide sequence