Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01805 and PS417_01810 are separated by 162 nucleotides PS417_01810 and PS417_01815 overlap by 8 nucleotides PS417_01815 and PS417_01820 are separated by 16 nucleotides
PS417_01805: PS417_01805 - amino acid ABC transporter substrate-binding protein, at 403,052 to 403,849
_01805
PS417_01810: PS417_01810 - ABC transporter permease, at 404,012 to 404,971
_01810
PS417_01815: PS417_01815 - peptide ABC transporter ATP-binding protein, at 404,964 to 405,698
_01815
PS417_01820: PS417_01820 - chemotaxis protein, at 405,715 to 407,622
_01820
Position (kb) 404
405 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 403.025 kb on + strand at 403.025 kb on + strand at 403.026 kb on - strand at 403.026 kb on - strand at 403.027 kb on + strand at 403.027 kb on + strand at 403.027 kb on + strand at 403.027 kb on + strand at 403.028 kb on - strand at 403.178 kb on + strand, within PS417_01805 at 403.179 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.458 kb on - strand, within PS417_01805 at 403.460 kb on - strand, within PS417_01805 at 403.460 kb on - strand, within PS417_01805 at 403.460 kb on - strand, within PS417_01805 at 403.460 kb on - strand, within PS417_01805 at 403.550 kb on + strand, within PS417_01805 at 403.550 kb on + strand, within PS417_01805 at 403.551 kb on - strand at 403.551 kb on - strand, within PS417_01805 at 403.590 kb on + strand, within PS417_01805 at 403.591 kb on - strand, within PS417_01805 at 403.632 kb on - strand, within PS417_01805 at 403.632 kb on - strand, within PS417_01805 at 403.632 kb on - strand, within PS417_01805 at 403.638 kb on + strand, within PS417_01805 at 403.639 kb on - strand, within PS417_01805 at 403.677 kb on - strand, within PS417_01805 at 403.734 kb on - strand, within PS417_01805 at 403.790 kb on + strand at 404.087 kb on + strand at 404.087 kb on + strand at 404.088 kb on - strand at 404.088 kb on - strand at 404.091 kb on - strand at 404.091 kb on - strand at 404.112 kb on - strand, within PS417_01810 at 404.142 kb on - strand, within PS417_01810 at 404.142 kb on - strand, within PS417_01810 at 404.509 kb on + strand, within PS417_01810 at 404.510 kb on - strand, within PS417_01810 at 404.517 kb on + strand, within PS417_01810 at 404.618 kb on + strand, within PS417_01810 at 404.618 kb on + strand, within PS417_01810 at 404.618 kb on + strand, within PS417_01810 at 404.618 kb on + strand, within PS417_01810 at 404.619 kb on - strand, within PS417_01810 at 404.619 kb on - strand, within PS417_01810 at 404.773 kb on + strand, within PS417_01810 at 404.773 kb on + strand, within PS417_01810 at 404.774 kb on - strand, within PS417_01810 at 404.775 kb on + strand, within PS417_01810 at 404.776 kb on - strand, within PS417_01810 at 404.900 kb on + strand at 404.900 kb on + strand at 404.987 kb on - strand at 404.987 kb on - strand at 405.249 kb on - strand, within PS417_01815 at 405.249 kb on - strand, within PS417_01815 at 405.697 kb on - strand at 405.838 kb on + strand at 405.838 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 403,025 + +0.0 403,025 + +0.9 403,026 - +1.5 403,026 - +0.4 403,027 + -0.4 403,027 + +0.4 403,027 + -0.2 403,027 + -0.7 403,028 - +0.4 403,178 + PS417_01805 0.16 -0.4 403,179 - PS417_01805 0.16 -1.1 403,458 - PS417_01805 0.51 +0.1 403,458 - PS417_01805 0.51 +0.3 403,458 - PS417_01805 0.51 +0.9 403,458 - PS417_01805 0.51 -1.2 403,458 - PS417_01805 0.51 -0.3 403,458 - PS417_01805 0.51 +0.5 403,460 - PS417_01805 0.51 +0.3 403,460 - PS417_01805 0.51 -0.1 403,460 - PS417_01805 0.51 +0.2 403,460 - PS417_01805 0.51 +0.3 403,550 + PS417_01805 0.62 -0.4 403,550 + PS417_01805 0.62 -1.8 403,551 - -1.2 403,551 - PS417_01805 0.63 -0.1 403,590 + PS417_01805 0.67 +1.8 403,591 - PS417_01805 0.68 -0.6 403,632 - PS417_01805 0.73 +2.1 403,632 - PS417_01805 0.73 -0.6 403,632 - PS417_01805 0.73 -0.8 403,638 + PS417_01805 0.73 +2.3 403,639 - PS417_01805 0.74 +2.8 403,677 - PS417_01805 0.78 -2.4 403,734 - PS417_01805 0.85 -0.1 403,790 + +0.1 404,087 + +0.6 404,087 + +0.3 404,088 - +0.8 404,088 - +0.0 404,091 - +0.0 404,091 - +0.3 404,112 - PS417_01810 0.10 -0.3 404,142 - PS417_01810 0.14 +0.7 404,142 - PS417_01810 0.14 +0.7 404,509 + PS417_01810 0.52 +0.3 404,510 - PS417_01810 0.52 +2.0 404,517 + PS417_01810 0.53 +1.0 404,618 + PS417_01810 0.63 +0.3 404,618 + PS417_01810 0.63 +4.3 404,618 + PS417_01810 0.63 +0.4 404,618 + PS417_01810 0.63 -0.4 404,619 - PS417_01810 0.63 +0.8 404,619 - PS417_01810 0.63 +0.9 404,773 + PS417_01810 0.79 -1.2 404,773 + PS417_01810 0.79 -1.7 404,774 - PS417_01810 0.79 -1.2 404,775 + PS417_01810 0.79 +0.5 404,776 - PS417_01810 0.80 +0.1 404,900 + +0.3 404,900 + +0.8 404,987 - -0.5 404,987 - -0.6 405,249 - PS417_01815 0.39 +0.8 405,249 - PS417_01815 0.39 -0.4 405,697 - -0.7 405,838 + -0.6 405,838 + -0.4
Or see this region's nucleotide sequence