Strain Fitness in Pseudomonas simiae WCS417 around PS417_18100
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,941,095 | + | PS417_18095 | 0.17 | -0.1 | |
3,941,096 | - | PS417_18095 | 0.17 | +1.4 | |
3,941,582 | + | PS417_18095 | 0.67 | -0.2 | |
3,941,604 | + | PS417_18095 | 0.69 | -0.5 | |
3,941,605 | - | PS417_18095 | 0.69 | +1.3 | |
3,941,880 | + | -1.2 | |||
3,941,881 | - | -0.2 | |||
3,942,646 | + | PS417_18100 | 0.75 | +0.1 | |
3,942,646 | + | PS417_18100 | 0.75 | +1.2 | |
3,942,739 | - | PS417_18100 | 0.85 | +2.3 | |
3,942,739 | - | PS417_18100 | 0.85 | +2.3 | |
3,942,739 | - | PS417_18100 | 0.85 | -0.4 | |
3,942,739 | - | PS417_18100 | 0.85 | -0.3 | |
3,942,746 | - | PS417_18100 | 0.85 | +0.4 | |
3,942,823 | - | -0.7 | |||
3,942,905 | - | +0.2 | |||
3,943,215 | - | PS417_18105 | 0.35 | -0.3 | |
3,943,457 | + | PS417_18105 | 0.61 | +1.7 | |
3,943,871 | + | -1.1 |
Or see this region's nucleotide sequence