Strain Fitness in Pseudomonas simiae WCS417 around PS417_17705
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,863,240 | - | +1.0 | |||
3,863,240 | - | -3.0 | |||
3,863,469 | - | PS417_17700 | 0.23 | +0.6 | |
3,863,469 | - | PS417_17700 | 0.23 | -0.3 | |
3,863,469 | - | -0.7 | |||
3,863,803 | + | PS417_17700 | 0.61 | +0.9 | |
3,863,906 | - | PS417_17700 | 0.73 | -0.1 | |
3,863,906 | - | PS417_17700 | 0.73 | +0.1 | |
3,864,029 | - | PS417_17700 | 0.88 | +1.5 | |
3,864,608 | + | PS417_17705 | 0.41 | -1.5 | |
3,864,794 | - | PS417_17705 | 0.60 | -2.2 | |
3,864,893 | + | PS417_17705 | 0.70 | -1.1 | |
3,865,562 | - | PS417_17710 | 0.51 | -0.3 | |
3,865,887 | + | -2.7 | |||
3,865,924 | + | +0.9 | |||
3,865,924 | + | +0.7 | |||
3,865,924 | + | -1.1 | |||
3,865,925 | - | -1.1 | |||
3,865,925 | - | -1.4 | |||
3,866,116 | + | +0.5 | |||
3,866,117 | - | -0.7 | |||
3,866,117 | - | -0.7 |
Or see this region's nucleotide sequence