Strain Fitness in Pseudomonas simiae WCS417 around PS417_16990

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,710,507	+		PS417_16985	0.43	+1.9
3,710,507	+		PS417_16985	0.43	-0.6
3,710,508	-		PS417_16985	0.43	+2.3
3,710,508	-		PS417_16985	0.43	+0.7
3,710,633	-		PS417_16985	0.52	+0.7
3,710,646	-		PS417_16985	0.53	-0.3
3,711,023	+		PS417_16985	0.82	-0.1
3,711,166	-				+0.6
3,711,346	-				+1.3
3,711,356	+				+0.3
3,711,357	-				-2.0
3,711,357	-				+0.2
3,711,357	-				-1.3
3,711,357	-				-0.4
3,711,400	+				+0.3
3,711,401	-				-1.8
3,711,433	+				+0.0
3,711,433	+				-0.7
3,711,433	+				-1.1
3,711,433	+				+0.4
3,711,433	+				-0.8
3,711,433	+				-0.1
3,711,434	-				+0.0
3,711,434	-				+0.3
3,711,434	-				+1.0
3,711,434	-				-1.3
3,711,434	-				+1.9
3,711,434	-				-1.7
3,711,434	-				+2.3
3,711,517	+				-1.8
3,711,517	+				+1.3
3,711,517	+				-0.4
3,711,523	+		PS417_16990	0.10	-0.7
3,711,524	-		PS417_16990	0.10	-1.0
3,711,524	-		PS417_16990	0.10	-1.4
3,711,670	+		PS417_16990	0.22	-3.3
3,711,702	-		PS417_16990	0.25	-1.3
3,711,839	+		PS417_16990	0.36	-3.0
3,711,840	-		PS417_16990	0.36	+0.5
3,712,396	+		PS417_16990	0.81	+2.3
3,712,396	+		PS417_16990	0.81	-2.8
3,712,494	+		PS417_16990	0.89	-2.3
3,712,494	+		PS417_16990	0.89	-2.5
3,712,561	+				-1.8
3,712,561	+				-2.6
3,712,562	-				-0.8
3,712,657	+				-1.6
3,712,658	-				-0.7
3,712,677	-				+0.3
3,712,691	-				-0.8
3,712,718	-				-0.7
3,712,721	-				+0.1
3,712,760	-				-0.3
3,712,831	+				-1.2
3,712,832	-				-0.2
3,713,377	-		PS417_16995	0.64	+3.3
3,713,377	-		PS417_16995	0.64	+0.5
3,713,467	+		PS417_16995	0.73	+0.7
3,713,468	-		PS417_16995	0.74	+2.1
3,713,599	+		PS417_16995	0.88	+0.2
3,713,600	-		PS417_16995	0.88	+0.7
3,713,600	-		PS417_16995	0.88	-1.2