Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16685 and PS417_16690 are separated by 86 nucleotides PS417_16690 and PS417_16695 overlap by 8 nucleotides PS417_16695 and PS417_16700 overlap by 4 nucleotides PS417_16700 and PS417_16705 are separated by 59 nucleotides
PS417_16685: PS417_16685 - multidrug MFS transporter, at 3,642,855 to 3,644,219
_16685
PS417_16690: PS417_16690 - hypothetical protein, at 3,644,306 to 3,644,758
_16690
PS417_16695: PS417_16695 - hypothetical protein, at 3,644,751 to 3,645,500
_16695
PS417_16700: PS417_16700 - hypothetical protein, at 3,645,497 to 3,646,321
_16700
PS417_16705: PS417_16705 - hypothetical protein, at 3,646,381 to 3,646,653
_16705
Position (kb)
3644
3645
3646 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3643.763 kb on + strand, within PS417_16685 at 3643.763 kb on + strand, within PS417_16685 at 3643.764 kb on - strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.790 kb on + strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.791 kb on - strand, within PS417_16685 at 3643.792 kb on + strand, within PS417_16685 at 3643.793 kb on - strand, within PS417_16685 at 3643.829 kb on + strand, within PS417_16685 at 3643.830 kb on - strand, within PS417_16685 at 3644.044 kb on + strand, within PS417_16685 at 3644.045 kb on - strand, within PS417_16685 at 3644.301 kb on + strand at 3644.477 kb on - strand, within PS417_16690 at 3644.804 kb on - strand at 3645.235 kb on + strand, within PS417_16695 at 3645.236 kb on - strand, within PS417_16695 at 3645.236 kb on - strand, within PS417_16695 at 3645.344 kb on - strand, within PS417_16695 at 3645.385 kb on + strand, within PS417_16695 at 3645.385 kb on + strand, within PS417_16695 at 3645.483 kb on + strand at 3645.787 kb on + strand, within PS417_16700 at 3645.839 kb on - strand, within PS417_16700 at 3645.880 kb on - strand, within PS417_16700 at 3645.880 kb on - strand, within PS417_16700 at 3645.973 kb on - strand, within PS417_16700 at 3646.174 kb on + strand, within PS417_16700 at 3646.175 kb on - strand, within PS417_16700 at 3646.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,643,763 + PS417_16685 0.67 -0.0 3,643,763 + PS417_16685 0.67 -0.3 3,643,764 - PS417_16685 0.67 +0.3 3,643,790 + PS417_16685 0.68 +0.9 3,643,790 + PS417_16685 0.68 -0.7 3,643,790 + PS417_16685 0.68 -0.6 3,643,791 - PS417_16685 0.69 -1.0 3,643,791 - PS417_16685 0.69 -0.2 3,643,792 + PS417_16685 0.69 -0.9 3,643,793 - PS417_16685 0.69 +2.9 3,643,829 + PS417_16685 0.71 +0.3 3,643,830 - PS417_16685 0.71 +0.1 3,644,044 + PS417_16685 0.87 +2.3 3,644,045 - PS417_16685 0.87 +0.6 3,644,301 + -0.3 3,644,477 - PS417_16690 0.38 +2.3 3,644,804 - +1.3 3,645,235 + PS417_16695 0.65 -0.0 3,645,236 - PS417_16695 0.65 -0.6 3,645,236 - PS417_16695 0.65 -0.7 3,645,344 - PS417_16695 0.79 +1.0 3,645,385 + PS417_16695 0.85 +0.3 3,645,385 + PS417_16695 0.85 +2.8 3,645,483 + -1.1 3,645,787 + PS417_16700 0.35 +0.2 3,645,839 - PS417_16700 0.41 -1.0 3,645,880 - PS417_16700 0.46 +0.1 3,645,880 - PS417_16700 0.46 -1.6 3,645,973 - PS417_16700 0.58 +1.0 3,646,174 + PS417_16700 0.82 -1.1 3,646,175 - PS417_16700 0.82 +1.6 3,646,387 - +2.0
Or see this region's nucleotide sequence