Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15820 and PS417_15825 are separated by 319 nucleotides PS417_15825 and PS417_15830 are separated by 238 nucleotides PS417_15830 and PS417_15835 are separated by 111 nucleotides
PS417_15820: PS417_15820 - universal stress protein UspA, at 3,464,989 to 3,465,891
_15820
PS417_15825: PS417_15825 - Crp/Fnr family transcriptional regulator, at 3,466,211 to 3,466,957
_15825
PS417_15830: PS417_15830 - GNAT family acetyltransferase, at 3,467,196 to 3,467,759
_15830
PS417_15835: PS417_15835 - universal stress protein, at 3,467,871 to 3,468,785
_15835
Position (kb)
3466
3467 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3465.601 kb on + strand, within PS417_15820 at 3465.702 kb on - strand, within PS417_15820 at 3465.767 kb on + strand, within PS417_15820 at 3465.880 kb on - strand at 3466.016 kb on - strand at 3466.016 kb on - strand at 3466.020 kb on - strand at 3466.151 kb on - strand at 3466.177 kb on + strand at 3466.177 kb on + strand at 3466.374 kb on - strand, within PS417_15825 at 3466.521 kb on + strand, within PS417_15825 at 3466.521 kb on + strand, within PS417_15825 at 3466.522 kb on - strand, within PS417_15825 at 3466.522 kb on - strand, within PS417_15825 at 3466.754 kb on + strand, within PS417_15825 at 3466.805 kb on + strand, within PS417_15825 at 3466.806 kb on - strand, within PS417_15825 at 3466.809 kb on + strand, within PS417_15825 at 3466.809 kb on + strand, within PS417_15825 at 3466.809 kb on + strand, within PS417_15825 at 3466.810 kb on - strand, within PS417_15825 at 3466.810 kb on - strand, within PS417_15825 at 3467.066 kb on + strand at 3467.067 kb on - strand at 3467.134 kb on + strand at 3467.135 kb on - strand at 3467.135 kb on - strand at 3467.334 kb on + strand, within PS417_15830 at 3467.372 kb on + strand, within PS417_15830 at 3467.457 kb on + strand, within PS417_15830 at 3467.458 kb on - strand, within PS417_15830 at 3467.458 kb on - strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.533 kb on + strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.534 kb on - strand, within PS417_15830 at 3467.898 kb on + strand at 3467.899 kb on - strand at 3467.915 kb on + strand at 3467.951 kb on + strand at 3467.952 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,465,601 + PS417_15820 0.68 -0.2 3,465,702 - PS417_15820 0.79 +0.3 3,465,767 + PS417_15820 0.86 +0.0 3,465,880 - -0.4 3,466,016 - -1.6 3,466,016 - -0.5 3,466,020 - +0.9 3,466,151 - -1.0 3,466,177 + -0.4 3,466,177 + +0.3 3,466,374 - PS417_15825 0.22 -0.9 3,466,521 + PS417_15825 0.41 -0.8 3,466,521 + PS417_15825 0.41 +1.3 3,466,522 - PS417_15825 0.42 -0.4 3,466,522 - PS417_15825 0.42 -0.5 3,466,754 + PS417_15825 0.73 -0.3 3,466,805 + PS417_15825 0.80 +0.2 3,466,806 - PS417_15825 0.80 -0.3 3,466,809 + PS417_15825 0.80 -0.2 3,466,809 + PS417_15825 0.80 +0.1 3,466,809 + PS417_15825 0.80 -1.2 3,466,810 - PS417_15825 0.80 +2.0 3,466,810 - PS417_15825 0.80 +1.6 3,467,066 + -0.0 3,467,067 - +0.3 3,467,134 + -0.1 3,467,135 - -0.3 3,467,135 - +1.0 3,467,334 + PS417_15830 0.24 -0.0 3,467,372 + PS417_15830 0.31 +0.4 3,467,457 + PS417_15830 0.46 +1.6 3,467,458 - PS417_15830 0.46 -0.4 3,467,458 - PS417_15830 0.46 +1.1 3,467,533 + PS417_15830 0.60 -0.0 3,467,533 + PS417_15830 0.60 +1.7 3,467,533 + PS417_15830 0.60 -0.1 3,467,533 + PS417_15830 0.60 +0.2 3,467,533 + PS417_15830 0.60 -0.5 3,467,533 + PS417_15830 0.60 -1.4 3,467,533 + PS417_15830 0.60 -0.8 3,467,534 - PS417_15830 0.60 +2.3 3,467,534 - PS417_15830 0.60 +1.7 3,467,534 - PS417_15830 0.60 -0.1 3,467,534 - PS417_15830 0.60 -1.6 3,467,534 - PS417_15830 0.60 +1.9 3,467,534 - PS417_15830 0.60 +2.0 3,467,898 + -2.4 3,467,899 - +2.1 3,467,915 + -2.4 3,467,951 + +4.3 3,467,952 - +1.3
Or see this region's nucleotide sequence