Strain Fitness in Pseudomonas simiae WCS417 around PS417_14990
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,275,539 | + | -2.7 | |||
3,275,565 | + | -1.9 | |||
3,275,567 | + | +0.6 | |||
3,275,672 | + | PS417_14985 | 0.31 | +1.3 | |
3,275,720 | + | PS417_14985 | 0.41 | -1.2 | |
3,275,720 | + | PS417_14985 | 0.41 | -1.3 | |
3,275,733 | - | PS417_14985 | 0.44 | +1.4 | |
3,275,883 | - | PS417_14985 | 0.76 | +2.3 | |
3,276,085 | + | -0.7 | |||
3,276,086 | - | +0.1 | |||
3,276,125 | + | +1.3 | |||
3,279,146 | - | -0.5 | |||
3,279,298 | - | +0.3 | |||
3,279,330 | + | -0.9 | |||
3,279,330 | + | -0.3 | |||
3,279,531 | + | PS417_14995 | 0.25 | +0.3 | |
3,279,531 | + | PS417_14995 | 0.25 | -0.4 | |
3,279,778 | - | PS417_14995 | 0.44 | +0.5 | |
3,279,869 | - | PS417_14995 | 0.51 | +0.2 | |
3,279,940 | - | PS417_14995 | 0.57 | +0.3 |
Or see this region's nucleotide sequence