Strain Fitness in Pseudomonas simiae WCS417 around PS417_14020

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,079,226	-		PS417_14015	0.25	-2.3
3,079,711	+		PS417_14015	0.80	-2.2
3,079,712	-		PS417_14015	0.81	+0.7
3,079,763	-		PS417_14015	0.86	-0.3
3,079,771	+		PS417_14015	0.87	-1.1
3,079,772	-		PS417_14015	0.87	-1.1
3,079,856	+				-0.3
3,079,888	+				-0.8
3,079,888	+				+0.1
3,079,907	+				-0.1
3,079,918	+				+0.6
3,079,937	-				-0.7
3,080,095	+				+2.3
3,080,095	+				-0.7
3,080,096	-				-1.8
3,080,096	-				-1.0
3,080,300	+		PS417_14020	0.21	-0.0
3,080,327	+				+2.3
3,080,328	-		PS417_14020	0.23	-0.4
3,080,328	-		PS417_14020	0.23	+0.2
3,080,328	-		PS417_14020	0.23	-1.4
3,080,354	+		PS417_14020	0.24	+1.2
3,080,355	-		PS417_14020	0.24	+1.3
3,080,371	-		PS417_14020	0.25	-0.6
3,080,502	+		PS417_14020	0.34	+0.8
3,080,502	+		PS417_14020	0.34	-0.1
3,080,503	-		PS417_14020	0.34	-0.2
3,080,503	-		PS417_14020	0.34	-0.7
3,080,503	-				-0.2
3,080,503	-		PS417_14020	0.34	-1.2
3,080,503	-		PS417_14020	0.34	-1.2
3,080,505	-		PS417_14020	0.34	-1.5
3,080,580	+		PS417_14020	0.39	+0.4
3,080,625	-		PS417_14020	0.42	+0.8
3,080,625	-		PS417_14020	0.42	-1.1
3,080,666	+		PS417_14020	0.45	+1.0
3,080,917	+		PS417_14020	0.61	+0.7
3,080,947	-		PS417_14020	0.63	+0.2
3,081,261	+		PS417_14020	0.83	-0.7
3,081,261	+		PS417_14020	0.83	+2.3
3,081,262	+		PS417_14020	0.83	-0.4
3,081,262	-		PS417_14020	0.83	-0.9
3,081,262	-		PS417_14020	0.83	-0.1
3,081,266	-				+0.8
3,081,281	+				+2.3
3,081,425	+				-0.1
3,081,425	+				+0.1
3,081,593	+				-0.8
3,081,652	+				-1.4
3,081,653	-				-3.2
3,081,669	-				+2.9
3,081,715	+				+0.1
3,082,154	-				+1.5
3,082,199	-				+0.3
3,082,199	-				-0.5
3,082,392	-		PS417_14030	0.36	-0.2
3,082,485	-		PS417_14030	0.54	-0.4
3,082,490	+		PS417_14030	0.55	-1.2
3,082,491	-		PS417_14030	0.55	-0.3