Strain Fitness in Pseudomonas simiae WCS417 around PS417_14005

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,075,718	-				+0.1
3,075,727	-				+1.9
3,075,757	-				-0.7
3,075,757	-				-0.7
3,075,805	+				-0.2
3,075,805	+				-0.5
3,075,806	-				+1.3
3,075,806	-				-2.1
3,076,064	-		PS417_14000	0.35	-1.7
3,076,126	+		PS417_14000	0.43	+1.0
3,076,127	-				-0.3
3,076,238	-		PS417_14000	0.55	-0.3
3,076,255	+		PS417_14000	0.57	+0.7
3,076,378	+		PS417_14000	0.71	+0.2
3,076,379	-		PS417_14000	0.71	-0.3
3,076,429	+		PS417_14000	0.77	+0.3
3,076,429	+		PS417_14000	0.77	-1.4
3,076,429	+		PS417_14000	0.77	-1.2
3,076,430	-		PS417_14000	0.77	-0.4
3,076,430	-		PS417_14000	0.77	-0.0
3,076,430	-		PS417_14000	0.77	-1.3
3,076,430	-		PS417_14000	0.77	-0.1
3,076,431	+		PS417_14000	0.77	+1.7
3,076,431	+		PS417_14000	0.77	+0.3
3,076,432	-		PS417_14000	0.77	-0.4
3,076,476	+		PS417_14000	0.82	-0.2
3,076,477	-		PS417_14000	0.82	+0.7
3,076,477	-		PS417_14000	0.82	-1.0
3,076,477	-		PS417_14000	0.82	+1.3
3,076,480	+		PS417_14000	0.83	-0.0
3,076,480	+		PS417_14000	0.83	-0.8
3,076,480	+		PS417_14000	0.83	-0.9
3,076,481	-		PS417_14000	0.83	+0.9
3,076,481	-		PS417_14000	0.83	-0.3
3,076,481	-		PS417_14000	0.83	-0.3
3,076,481	-		PS417_14000	0.83	-0.8
3,076,555	+				-0.4
3,076,555	+				+1.9
3,076,555	+				+0.2
3,076,556	-				+0.0
3,076,556	-				-0.2
3,076,703	+				+3.1
3,076,953	+		PS417_14005	0.25	-1.7
3,076,954	-		PS417_14005	0.25	-0.3
3,076,954	-		PS417_14005	0.25	-1.0
3,077,175	+		PS417_14005	0.45	-2.5
3,077,229	+		PS417_14005	0.50	+0.3
3,077,334	+		PS417_14005	0.60	-0.7
3,077,335	-		PS417_14005	0.60	-0.3
3,077,352	+		PS417_14005	0.62	-0.6
3,077,388	+		PS417_14005	0.65	-1.6
3,077,389	-		PS417_14005	0.65	-1.7
3,077,389	-		PS417_14005	0.65	-1.7
3,077,389	-		PS417_14005	0.65	-0.6
3,077,560	-				+2.3
3,077,560	-		PS417_14005	0.81	-0.2
3,077,751	+				-2.2
3,077,753	+				-2.0
3,077,786	+				+0.3
3,077,786	+				+0.3
3,077,789	+				+0.2
3,077,798	+				+0.4
3,077,798	+				+1.8
3,077,799	-				+0.2
3,077,799	-				+1.0
3,077,799	-				-0.1
3,077,802	-				-0.7
3,077,897	-				+0.3
3,077,897	-				-0.4
3,078,002	+				+0.6
3,078,009	-				-0.2
3,078,057	-				+0.8
3,078,057	-				-1.0
3,078,166	+		PS417_14010	0.17	+0.1
3,078,166	+		PS417_14010	0.17	+0.3
3,078,206	+		PS417_14010	0.21	-1.9
3,078,206	+		PS417_14010	0.21	-0.8
3,078,206	+		PS417_14010	0.21	-0.5
3,078,416	+		PS417_14010	0.44	-0.2
3,078,416	+		PS417_14010	0.44	+0.0
3,078,416	+		PS417_14010	0.44	+0.0
3,078,416	+		PS417_14010	0.44	+0.0
3,078,416	+		PS417_14010	0.44	+1.0
3,078,417	-		PS417_14010	0.44	-1.6
3,078,451	+		PS417_14010	0.48	+0.0
3,078,451	+		PS417_14010	0.48	+1.7
3,078,451	+		PS417_14010	0.48	+0.5
3,078,452	-		PS417_14010	0.48	+1.0
3,078,724	+		PS417_14010	0.77	-2.5
3,078,724	+		PS417_14010	0.77	+1.0
3,078,725	-		PS417_14010	0.77	-0.4
3,078,725	-		PS417_14010	0.77	-0.1
3,078,725	-		PS417_14010	0.77	-1.1