Strain Fitness in Pseudomonas simiae WCS417 around PS417_13690

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
3,011,491	+				-1.1
3,011,492	-				+0.3
3,011,535	+				+0.3
3,011,580	+				-0.7
3,011,765	+		PS417_13685	0.32	-0.3
3,011,817	+		PS417_13685	0.43	-0.2
3,011,844	+		PS417_13685	0.48	-1.0
3,011,844	+		PS417_13685	0.48	-0.8
3,011,844	+		PS417_13685	0.48	+1.0
3,011,844	+		PS417_13685	0.48	-1.6
3,011,845	-		PS417_13685	0.49	-0.6
3,011,845	-		PS417_13685	0.49	-0.3
3,012,007	+		PS417_13685	0.82	+0.7
3,012,105	+				-0.5
3,012,122	+				-0.8
3,012,171	+				-0.2
3,012,445	-		PS417_13690	0.17	+2.0
3,012,544	-		PS417_13690	0.25	-0.3
3,012,544	-		PS417_13690	0.25	+0.7
3,012,730	+		PS417_13690	0.38	+1.3
3,012,730	+		PS417_13690	0.38	-0.4
3,012,730	+				+2.3
3,012,731	-				+0.7
3,012,800	+		PS417_13690	0.44	+0.7
3,012,810	+		PS417_13690	0.44	+1.3
3,012,810	+		PS417_13690	0.44	-0.3
3,012,811	-		PS417_13690	0.44	-1.5
3,012,811	-		PS417_13690	0.44	+0.8
3,012,910	-				+2.3
3,012,910	-				+1.7
3,012,910	-		PS417_13690	0.52	-1.0
3,012,919	+		PS417_13690	0.52	-0.3
3,012,921	+		PS417_13690	0.52	+0.1
3,012,921	+		PS417_13690	0.52	+3.1
3,012,922	-		PS417_13690	0.53	+0.3
3,013,023	+		PS417_13690	0.60	+0.5
3,013,023	+		PS417_13690	0.60	-0.7
3,013,028	+		PS417_13690	0.60	-0.5
3,013,028	+		PS417_13690	0.60	+1.2
3,013,029	-		PS417_13690	0.60	+0.7
3,013,619	+				+0.9
3,013,619	+				+0.1
3,013,619	+				+0.2
3,013,632	+				+1.3
3,013,633	-				+0.2
3,013,633	-				-0.3
3,013,633	-				-0.4
3,013,673	+				-0.4
3,013,677	+				+1.3
3,013,677	+				+0.6
3,013,677	+				-0.8
3,013,677	+				+0.8
3,013,677	+				+0.9
3,013,677	+				+2.7
3,013,678	-				-0.2
3,013,678	-				-1.9
3,013,678	-				-0.4
3,013,678	-				+0.1
3,013,678	-				+0.4
3,013,812	+		PS417_13695	0.10	-0.4
3,013,813	-		PS417_13695	0.10	+0.3
3,013,813	-		PS417_13695	0.10	-0.1
3,013,918	+				-0.3
3,013,920	+		PS417_13695	0.18	+0.5
3,013,920	+		PS417_13695	0.18	-0.5
3,013,920	+		PS417_13695	0.18	-1.2
3,013,953	+		PS417_13695	0.21	+0.5
3,013,953	+		PS417_13695	0.21	+0.1
3,013,954	-		PS417_13695	0.21	+2.3
3,013,954	-		PS417_13695	0.21	-0.8
3,014,088	+				+3.9
3,014,157	+		PS417_13695	0.36	-0.8
3,014,294	-		PS417_13695	0.47	-0.9
3,014,294	-		PS417_13695	0.47	-1.1
3,014,294	-		PS417_13695	0.47	+0.9
3,014,295	+		PS417_13695	0.47	+0.2
3,014,295	+		PS417_13695	0.47	-0.1
3,014,295	+		PS417_13695	0.47	-0.4
3,014,295	+		PS417_13695	0.47	+0.7
3,014,295	+		PS417_13695	0.47	+1.6
3,014,296	-		PS417_13695	0.47	+0.4
3,014,296	-		PS417_13695	0.47	-1.4
3,014,298	+		PS417_13695	0.47	+1.6
3,014,298	+		PS417_13695	0.47	-0.1
3,014,299	-		PS417_13695	0.47	-2.0
3,014,331	+		PS417_13695	0.50	+1.1
3,014,331	+		PS417_13695	0.50	-1.7
3,014,364	+		PS417_13695	0.52	+0.3
3,014,364	+		PS417_13695	0.52	+0.3
3,014,418	+		PS417_13695	0.56	-0.9
3,014,418	+		PS417_13695	0.56	-0.4
3,014,419	-				+0.7
3,014,419	-		PS417_13695	0.56	+0.7
3,014,419	-		PS417_13695	0.56	-1.8
3,014,422	+		PS417_13695	0.56	+2.0