Strain Fitness in Pseudomonas simiae WCS417 around PS417_13245
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,895,783 | + | +0.7 | |||
2,895,783 | + | -0.7 | |||
2,895,783 | + | -0.4 | |||
2,896,036 | - | PS417_13240 | 0.31 | -1.3 | |
2,896,209 | + | PS417_13240 | 0.48 | -0.1 | |
2,896,491 | + | PS417_13240 | 0.75 | -1.9 | |
2,896,679 | + | -0.4 | |||
2,896,680 | - | -0.7 | |||
2,896,765 | - | -1.6 | |||
2,897,069 | + | PS417_13245 | 0.30 | -0.6 | |
2,897,519 | + | PS417_13245 | 0.70 | +2.7 | |
2,897,519 | + | PS417_13245 | 0.70 | +0.3 | |
2,897,520 | - | PS417_13245 | 0.70 | -1.1 | |
2,897,522 | - | PS417_13245 | 0.71 | +0.3 | |
2,898,067 | + | PS417_13250 | 0.13 | -0.4 | |
2,898,341 | + | PS417_13250 | 0.29 | -2.1 | |
2,898,342 | - | PS417_13250 | 0.29 | -1.1 |
Or see this region's nucleotide sequence