Strain Fitness in Pseudomonas simiae WCS417 around PS417_12630

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,747,323	+				-0.2
2,747,335	+				-0.5
2,747,336	-				-0.6
2,747,336	-				+1.7
2,747,394	-				-0.3
2,747,493	+		PS417_12625	0.19	-0.7
2,747,546	+		PS417_12625	0.26	-1.4
2,747,677	+		PS417_12625	0.42	-0.2
2,747,757	+		PS417_12625	0.53	-0.5
2,747,757	+		PS417_12625	0.53	+2.3
2,747,758	-		PS417_12625	0.53	+0.4
2,747,874	-				-1.0
2,748,030	+		PS417_12625	0.87	+0.2
2,748,030	+		PS417_12625	0.87	-0.4
2,748,030	+		PS417_12625	0.87	-1.0
2,748,030	+		PS417_12625	0.87	+0.4
2,748,030	+		PS417_12625	0.87	+0.7
2,748,031	-		PS417_12625	0.88	-1.3
2,748,031	-		PS417_12625	0.88	-0.1
2,748,031	-		PS417_12625	0.88	+3.9
2,748,031	-		PS417_12625	0.88	-0.4
2,748,044	+		PS417_12625	0.89	+0.9
2,748,045	-		PS417_12625	0.89	-0.9
2,748,111	+				-0.0
2,748,224	+				+2.3
2,748,225	-				+0.2
2,748,233	+				+0.0
2,748,404	+				-0.0
2,748,404	+				+0.5
2,748,406	+				-1.4
2,748,406	+				-0.1
2,748,407	-				-0.7
2,748,407	-				-0.1
2,748,407	-				+0.7
2,748,407	-				-0.5
2,748,407	-				+2.3
2,748,407	-				-1.0
2,748,576	+		PS417_12630	0.21	+1.0
2,748,600	-		PS417_12630	0.23	-0.1
2,748,625	+				+0.3
2,748,677	-		PS417_12630	0.29	-0.1
2,748,703	-		PS417_12630	0.31	-0.3
2,748,754	+		PS417_12630	0.35	+0.1
2,748,755	-		PS417_12630	0.35	+0.3
2,748,755	-		PS417_12630	0.35	-0.4
2,748,755	-		PS417_12630	0.35	+1.6
2,748,845	-		PS417_12630	0.43	-0.1
2,748,860	-		PS417_12630	0.44	-0.3
2,749,043	-		PS417_12630	0.59	+1.1
2,749,082	-		PS417_12630	0.62	-0.5
2,749,625	-				-0.2
2,749,803	-				+0.3
2,749,909	+				+1.0
2,749,910	-				+2.9
2,750,157	+		PS417_12635	0.32	+0.5