Strain Fitness in Pseudomonas simiae WCS417 around PS417_12415

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,698,929	+		PS417_12405	0.24	-0.1
2,698,929	+		PS417_12405	0.24	+0.6
2,698,930	-		PS417_12405	0.24	+0.0
2,698,930	-		PS417_12405	0.24	+0.2
2,699,454	-				+0.1
2,699,486	-				-0.3
2,699,486	-				+0.7
2,699,508	-				-1.0
2,699,508	-				+0.3
2,699,530	-				-0.0
2,699,829	+				+0.7
2,699,858	-				-0.1
2,699,858	-				-0.0
2,699,858	-				+0.7
2,699,903	-				-1.3
2,699,990	+		PS417_12415	0.10	-1.7
2,700,073	+		PS417_12415	0.18	-0.6
2,700,341	-		PS417_12415	0.42	-0.9
2,700,341	-		PS417_12415	0.42	+0.1
2,700,341	-		PS417_12415	0.42	-2.0
2,700,389	+		PS417_12415	0.47	-3.4
2,700,390	-		PS417_12415	0.47	-0.8
2,700,390	-		PS417_12415	0.47	-0.3
2,700,399	+		PS417_12415	0.47	-0.8
2,700,399	+		PS417_12415	0.47	+0.4
2,700,399	+		PS417_12415	0.47	-0.3
2,700,399	+		PS417_12415	0.47	-0.9
2,700,399	+		PS417_12415	0.47	+1.3
2,700,399	+		PS417_12415	0.47	-0.3
2,700,400	-		PS417_12415	0.48	-0.3
2,700,400	-				+1.3
2,700,400	-		PS417_12415	0.48	-1.2
2,700,501	-		PS417_12415	0.57	-0.5
2,700,898	+				+0.1
2,700,899	-				+1.3
2,701,094	+				+1.1
2,701,095	-				+0.3
2,701,109	-				+2.3
2,701,109	-				+0.5
2,701,129	+				-1.9
2,701,130	-				+3.3
2,701,130	-				-0.0
2,701,186	+				-0.9
2,701,188	+				-2.0
2,701,189	-				+0.7
2,701,970	+				+0.8