Strain Fitness in Pseudomonas simiae WCS417 around PS417_12255

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,662,868	+		PS417_12250	0.13	-0.0
2,662,997	+		PS417_12250	0.27	-0.7
2,662,998	-		PS417_12250	0.27	-0.1
2,663,129	+		PS417_12250	0.41	-1.2
2,663,130	-		PS417_12250	0.42	-1.0
2,663,130	-		PS417_12250	0.42	-0.1
2,663,333	-		PS417_12250	0.64	-0.0
2,663,573	-		PS417_12250	0.90	+0.2
2,663,573	-		PS417_12250	0.90	+0.5
2,663,679	-				-0.5
2,663,679	-				+1.3
2,663,703	+				+3.9
2,663,703	+				+0.4
2,663,703	+				-0.1
2,663,777	-				-0.4
2,663,856	-		PS417_12255	0.23	-1.3
2,664,026	+		PS417_12255	0.72	-0.5
2,664,026	+		PS417_12255	0.72	-0.8
2,664,026	+		PS417_12255	0.72	+0.1
2,664,183	+				+0.7
2,664,184	-				-1.1
2,664,291	+		PS417_12260	0.46	-0.7
2,664,292	-		PS417_12260	0.46	+2.3
2,664,301	+		PS417_12260	0.50	+0.7
2,664,364	-		PS417_12260	0.77	+0.1
2,664,364	-		PS417_12260	0.77	+0.3
2,664,407	+				-2.0
2,664,408	-				+0.9
2,664,408	-				-1.2
2,664,408	-				-0.8
2,664,440	-				-1.8
2,664,448	+				+0.1
2,664,448	+				+1.4
2,664,448	+				+0.2
2,664,448	+				-0.4
2,664,483	-				+0.3
2,664,483	-				+0.6
2,664,487	+				+0.0
2,664,488	-				-0.5
2,664,488	-				-0.3
2,664,491	+				-1.4
2,664,507	+				+1.7
2,664,508	-				-1.0
2,664,543	+				+0.7
2,664,544	-				-0.2
2,664,570	-				+0.3
2,664,605	+				+0.5
2,664,605	+				+1.0
2,664,605	+				+4.3
2,664,607	+				+0.1
2,664,608	-				-0.3
2,664,611	+				+0.0
2,664,612	-				+0.3
2,664,612	-				-1.0
2,664,709	-		PS417_12265	0.11	-0.3
2,664,787	+		PS417_12265	0.25	-0.3
2,664,787	+		PS417_12265	0.25	-2.0
2,664,798	+		PS417_12265	0.27	+0.2
2,664,827	-		PS417_12265	0.32	+0.1
2,664,827	-		PS417_12265	0.32	+0.4
2,664,887	-		PS417_12265	0.43	-0.9