Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11440 and PS417_11445 are separated by 80 nucleotides PS417_11445 and PS417_11450 are separated by 107 nucleotides
PS417_11440: PS417_11440 - hypothetical protein, at 2,462,623 to 2,463,582
_11440
PS417_11445: PS417_11445 - enoyl-CoA hydratase, at 2,463,663 to 2,464,448
_11445
PS417_11450: PS417_11450 - AraC family transcriptional regulator, at 2,464,556 to 2,465,353
_11450
Position (kb)
2463
2464
2465 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2462.683 kb on + strand at 2462.683 kb on + strand at 2462.683 kb on + strand at 2463.020 kb on + strand, within PS417_11440 at 2463.332 kb on + strand, within PS417_11440 at 2463.333 kb on - strand, within PS417_11440 at 2463.599 kb on + strand at 2463.665 kb on - strand at 2463.949 kb on + strand, within PS417_11445 at 2463.950 kb on - strand, within PS417_11445 at 2464.001 kb on + strand, within PS417_11445 at 2464.036 kb on + strand, within PS417_11445 at 2464.037 kb on - strand, within PS417_11445 at 2464.289 kb on - strand, within PS417_11445 at 2464.317 kb on + strand, within PS417_11445 at 2464.417 kb on - strand at 2464.422 kb on + strand at 2464.536 kb on + strand at 2464.654 kb on + strand, within PS417_11450 at 2464.655 kb on - strand, within PS417_11450 at 2464.679 kb on + strand, within PS417_11450 at 2464.814 kb on + strand, within PS417_11450 at 2464.815 kb on - strand, within PS417_11450 at 2464.896 kb on + strand, within PS417_11450 at 2464.897 kb on - strand, within PS417_11450 at 2465.318 kb on + strand at 2465.422 kb on + strand at 2465.423 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 2,462,683 + +2.3 2,462,683 + +0.3 2,462,683 + -0.7 2,463,020 + PS417_11440 0.41 -0.2 2,463,332 + PS417_11440 0.74 -0.3 2,463,333 - PS417_11440 0.74 -1.8 2,463,599 + +0.7 2,463,665 - +0.9 2,463,949 + PS417_11445 0.36 +1.4 2,463,950 - PS417_11445 0.37 +0.7 2,464,001 + PS417_11445 0.43 +1.4 2,464,036 + PS417_11445 0.47 +0.0 2,464,037 - PS417_11445 0.48 +0.3 2,464,289 - PS417_11445 0.80 -0.1 2,464,317 + PS417_11445 0.83 +0.7 2,464,417 - -1.6 2,464,422 + +0.2 2,464,536 + -0.4 2,464,654 + PS417_11450 0.12 +1.7 2,464,655 - PS417_11450 0.12 +0.9 2,464,679 + PS417_11450 0.15 -0.7 2,464,814 + PS417_11450 0.32 -0.2 2,464,815 - PS417_11450 0.32 +2.9 2,464,896 + PS417_11450 0.43 +0.3 2,464,897 - PS417_11450 0.43 -1.5 2,465,318 + -1.6 2,465,422 + +2.3 2,465,423 - +1.3
Or see this region's nucleotide sequence