Strain Fitness in Pseudomonas simiae WCS417 around PS417_10520
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,244,174 | - | PS417_10515 | 0.28 | -1.4 | |
2,244,174 | - | PS417_10515 | 0.28 | -0.7 | |
2,244,657 | + | PS417_10515 | 0.69 | -1.0 | |
2,244,657 | + | PS417_10515 | 0.69 | -0.5 | |
2,244,657 | + | PS417_10515 | 0.69 | +3.3 | |
2,244,657 | + | PS417_10515 | 0.69 | -1.7 | |
2,244,858 | - | PS417_10515 | 0.86 | +0.1 | |
2,245,184 | - | PS417_10520 | 0.22 | -1.9 | |
2,245,370 | - | PS417_10520 | 0.51 | -2.8 | |
2,245,370 | - | PS417_10520 | 0.51 | +1.3 | |
2,245,370 | - | PS417_10520 | 0.51 | -3.0 | |
2,245,394 | - | PS417_10520 | 0.54 | -0.6 | |
2,245,708 | + | +2.3 | |||
2,245,731 | + | -1.4 | |||
2,245,732 | - | -0.2 | |||
2,245,794 | + | -0.0 | |||
2,246,489 | - | -0.7 | |||
2,246,571 | - | +0.9 |
Or see this region's nucleotide sequence