Strain Fitness in Pseudomonas simiae WCS417 around PS417_10100

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
2,165,297	+		PS417_10090	0.86	-0.2
2,165,297	+		PS417_10090	0.86	-0.8
2,165,297	+		PS417_10090	0.86	-1.0
2,165,297	+		PS417_10090	0.86	-0.2
2,165,298	-				+2.3
2,165,298	-		PS417_10090	0.87	+0.5
2,165,298	-		PS417_10090	0.87	-0.3
2,165,299	+		PS417_10090	0.87	-1.8
2,165,299	+		PS417_10090	0.87	+0.9
2,165,300	-		PS417_10090	0.87	-0.6
2,165,328	+				+0.4
2,165,346	+				+0.4
2,165,347	-				-0.7
2,165,357	-				-1.7
2,165,412	+				+1.1
2,165,412	+				+0.5
2,165,485	+				-1.9
2,165,485	+				+0.1
2,165,486	-				+1.6
2,165,603	+		PS417_10095	0.13	-2.6
2,165,603	+		PS417_10095	0.13	-0.7
2,166,251	+				+0.3
2,166,271	+				+2.3
2,166,271	+				+0.2
2,166,272	-				-1.8
2,166,272	-				-0.1
2,166,272	-				+1.4
2,166,272	-				-0.5
2,166,272	-				+0.3
2,166,279	+				+0.6
2,166,334	+				-4.0
2,166,334	+				+0.9
2,166,463	+				+0.7
2,166,463	+		PS417_10100	0.22	-2.0
2,166,519	+		PS417_10100	0.28	+0.5
2,166,520	-		PS417_10100	0.28	+0.7
2,166,619	+		PS417_10100	0.39	-0.5
2,166,772	+		PS417_10100	0.54	+1.3
2,166,772	+		PS417_10100	0.54	-0.0
2,166,795	+		PS417_10100	0.57	-0.8
2,166,834	+				+2.3
2,166,988	-		PS417_10100	0.77	+0.3
2,167,209	+				-0.3
2,167,210	-				-0.4
2,167,271	+				+0.1
2,167,272	-				+0.3
2,167,397	+		PS417_10105	0.24	-0.0
2,167,510	+				+2.3
2,167,511	-		PS417_10105	0.43	+1.0
2,167,511	-		PS417_10105	0.43	+0.1
2,167,528	+		PS417_10105	0.46	+0.0
2,167,623	+		PS417_10105	0.63	-0.7
2,167,623	+		PS417_10105	0.63	-0.6
2,167,842	-				+0.4
2,167,842	-				+0.5
2,168,061	+		PS417_10110	0.32	-1.5
2,168,062	-		PS417_10110	0.32	+0.2
2,168,062	-		PS417_10110	0.32	+0.0
2,168,062	-		PS417_10110	0.32	-0.1
2,168,156	-		PS417_10110	0.51	+0.7
2,168,156	-		PS417_10110	0.51	+0.7