Strain Fitness in Pseudomonas simiae WCS417 around PS417_08415

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,843,391	+		PS417_08405	0.11	+0.4
1,843,413	-		PS417_08405	0.14	-2.6
1,843,415	+		PS417_08405	0.15	+1.3
1,843,415	+		PS417_08405	0.15	+0.1
1,843,415	+		PS417_08405	0.15	-1.0
1,843,416	-		PS417_08405	0.15	-0.2
1,843,577	+		PS417_08405	0.41	-0.5
1,843,577	+		PS417_08405	0.41	-2.0
1,843,577	+		PS417_08405	0.41	+1.3
1,843,578	-		PS417_08405	0.42	-0.3
1,843,578	-		PS417_08405	0.42	+0.6
1,843,731	+		PS417_08405	0.67	+0.1
1,843,731	+		PS417_08405	0.67	-0.4
1,843,731	+		PS417_08405	0.67	+0.7
1,843,732	-		PS417_08405	0.67	-0.4
1,843,732	-		PS417_08405	0.67	+0.3
1,843,732	-		PS417_08405	0.67	-0.3
1,843,732	-		PS417_08405	0.67	+1.6
1,843,767	+		PS417_08405	0.73	-0.3
1,843,767	+		PS417_08405	0.73	-0.5
1,843,767	+		PS417_08405	0.73	-0.4
1,843,768	-				+1.9
1,843,886	+				-0.9
1,843,886	+				+1.5
1,843,886	+				-0.1
1,843,887	-				+0.4
1,843,887	-				+0.7
1,843,887	-				-0.7
1,843,915	+				+0.5
1,844,016	+				-0.8
1,844,016	+				-0.0
1,844,020	+		PS417_08410	0.10	+2.3
1,844,020	+		PS417_08410	0.10	-0.1
1,844,020	+		PS417_08410	0.10	+0.6
1,844,281	+				-1.4
1,844,282	-				+0.1
1,844,311	+				-1.3
1,844,311	+				-1.5
1,844,311	+				+0.1
1,844,311	+				-0.4
1,844,312	-				-0.5
1,844,312	-				+0.4
1,844,324	+				+0.3
1,844,324	+				+0.3
1,844,325	-				-0.4
1,844,328	+				-0.5
1,844,497	+		PS417_08415	0.15	+1.7
1,844,498	-				+3.3
1,844,498	-		PS417_08415	0.15	+1.9
1,844,530	+		PS417_08415	0.18	+0.6
1,844,530	+		PS417_08415	0.18	-0.1
1,844,531	-		PS417_08415	0.18	+2.8
1,844,531	-		PS417_08415	0.18	+0.7
1,844,531	-		PS417_08415	0.18	+1.4
1,844,531	-		PS417_08415	0.18	-0.3
1,844,683	+		PS417_08415	0.34	-0.9
1,844,684	-		PS417_08415	0.34	+1.4
1,844,686	+				+2.3
1,844,686	+		PS417_08415	0.34	+1.5
1,844,686	+		PS417_08415	0.34	+0.2
1,844,686	+		PS417_08415	0.34	-0.3
1,844,686	+		PS417_08415	0.34	+2.0
1,844,687	-		PS417_08415	0.34	+0.6
1,844,687	-		PS417_08415	0.34	+2.9
1,844,713	+		PS417_08415	0.37	-0.5
1,844,757	+		PS417_08415	0.41	+2.3
1,844,757	+		PS417_08415	0.41	-0.8
1,845,065	-		PS417_08415	0.73	+0.1
1,845,066	+		PS417_08415	0.73	+4.3
1,845,095	-		PS417_08415	0.76	+0.4
1,845,095	-		PS417_08415	0.76	+0.3
1,845,109	-		PS417_08415	0.78	+0.8
1,845,337	+				+1.5
1,845,337	+				-0.8
1,845,337	+				-0.3
1,845,337	+				+0.8
1,845,391	+				+0.1
1,845,391	+				-0.9
1,845,392	-				+2.7
1,845,423	+				+1.0
1,845,457	+				+2.1
1,845,460	+				+0.7
1,845,461	-				+0.7
1,845,485	+		PS417_08420	0.10	+1.5
1,845,560	+		PS417_08420	0.40	+2.3
1,845,561	-		PS417_08420	0.40	-1.5
1,845,561	-		PS417_08420	0.40	+1.0
1,845,565	+				+2.3
1,845,734	+				+1.2
1,845,735	-				+1.6
1,845,737	+				+0.1
1,845,738	-				-1.7
1,845,738	-				-0.6
1,845,742	-				+0.1
1,845,745	+				-0.6
1,845,745	+				+2.3
1,845,745	+				-0.7
1,845,746	-				-0.7
1,845,746	-				+1.0
1,845,746	-				+2.9
1,845,746	-				+0.1
1,845,746	-				-0.2
1,845,764	+				+0.3
1,845,764	+				-1.0
1,845,765	-				+0.7
1,845,776	+				+0.7
1,845,776	+				+1.4
1,845,780	+				+0.1
1,845,781	-				+0.0
1,845,781	-				+0.4
1,845,781	-				+0.5
1,845,781	-				+0.9
1,845,790	+				-0.1
1,845,791	-				-0.0
1,845,796	+				+2.3
1,845,796	+				-0.7
1,845,800	-				+0.1
1,845,804	-				+1.9
1,845,877	-				-0.1
1,845,948	-				-0.6
1,845,948	-				-0.4
1,845,974	+				+0.1
1,845,975	-				-0.0
1,845,975	-				+1.0
1,845,976	+				+0.7
1,845,977	-				-1.4
1,845,988	+				-0.4
1,846,028	+				+1.5
1,846,029	-				+0.3
1,846,029	-				-0.6
1,846,036	+				-2.7
1,846,036	+				+1.6
1,846,036	+				-0.9
1,846,036	+				+0.2
1,846,037	-				+0.7
1,846,037	-				+2.3
1,846,037	-				+1.1
1,846,067	+				-0.0
1,846,067	+				+0.1
1,846,126	+				+0.7
1,846,126	+				-0.4
1,846,127	-				-0.6
1,846,127	-				+1.7
1,846,186	-				+1.6
1,846,188	+				-0.9
1,846,188	+				+0.4
1,846,188	+				+0.0
1,846,196	-				-0.0
1,846,208	+				-0.0
1,846,254	+				+0.3
1,846,254	+				+1.3
1,846,254	+				-1.4
1,846,318	+				+2.2