Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00725 and PS417_00730 are separated by 81 nucleotides PS417_00730 and PS417_00735 are separated by 147 nucleotides
PS417_00725: PS417_00725 - RND transporter, at 150,688 to 152,130
_00725
PS417_00730: PS417_00730 - NADH:ubiquinone oxidoreductase subunit N, at 152,212 to 152,844
_00730
PS417_00735: PS417_00735 - hypothetical protein, at 152,992 to 154,488
_00735
Position (kb)
152
153 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 151.375 kb on + strand, within PS417_00725 at 151.376 kb on - strand, within PS417_00725 at 151.376 kb on - strand, within PS417_00725 at 151.376 kb on - strand, within PS417_00725 at 151.865 kb on - strand, within PS417_00725 at 151.865 kb on - strand, within PS417_00725 at 152.000 kb on - strand at 152.141 kb on - strand at 152.224 kb on + strand at 152.224 kb on + strand at 152.261 kb on + strand at 152.278 kb on + strand, within PS417_00730 at 152.278 kb on + strand, within PS417_00730 at 152.278 kb on + strand, within PS417_00730 at 152.279 kb on - strand, within PS417_00730 at 152.389 kb on + strand, within PS417_00730 at 152.497 kb on + strand, within PS417_00730 at 152.512 kb on + strand, within PS417_00730 at 152.513 kb on - strand, within PS417_00730 at 152.698 kb on + strand, within PS417_00730 at 152.836 kb on + strand at 152.837 kb on - strand at 152.899 kb on + strand at 152.899 kb on + strand at 152.997 kb on + strand at 152.997 kb on + strand at 153.009 kb on - strand at 153.009 kb on - strand at 153.064 kb on + strand at 153.282 kb on + strand, within PS417_00735 at 153.283 kb on - strand, within PS417_00735 at 153.356 kb on - strand, within PS417_00735 at 153.442 kb on + strand, within PS417_00735 at 153.443 kb on - strand, within PS417_00735 at 153.578 kb on - strand, within PS417_00735 at 153.579 kb on + strand, within PS417_00735 at 153.579 kb on + strand, within PS417_00735 at 153.580 kb on - strand, within PS417_00735 at 153.580 kb on - strand, within PS417_00735 at 153.688 kb on + strand, within PS417_00735 at 153.827 kb on - strand, within PS417_00735
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 151,375 + PS417_00725 0.48 -0.3 151,376 - PS417_00725 0.48 +2.0 151,376 - PS417_00725 0.48 -1.9 151,376 - PS417_00725 0.48 +1.4 151,865 - PS417_00725 0.82 +3.1 151,865 - PS417_00725 0.82 +2.4 152,000 - -2.0 152,141 - -0.4 152,224 + -0.6 152,224 + -1.3 152,261 + -0.8 152,278 + PS417_00730 0.10 -2.4 152,278 + PS417_00730 0.10 -2.6 152,278 + PS417_00730 0.10 -0.0 152,279 - PS417_00730 0.11 +0.0 152,389 + PS417_00730 0.28 -1.4 152,497 + PS417_00730 0.45 -0.8 152,512 + PS417_00730 0.47 +0.4 152,513 - PS417_00730 0.48 +0.3 152,698 + PS417_00730 0.77 -0.7 152,836 + +0.4 152,837 - +0.1 152,899 + -1.2 152,899 + -0.7 152,997 + -0.1 152,997 + -0.8 153,009 - -0.7 153,009 - -0.4 153,064 + +1.4 153,282 + PS417_00735 0.19 -2.0 153,283 - PS417_00735 0.19 -0.4 153,356 - PS417_00735 0.24 -0.3 153,442 + PS417_00735 0.30 -1.0 153,443 - PS417_00735 0.30 +0.5 153,578 - PS417_00735 0.39 +0.2 153,579 + PS417_00735 0.39 +1.4 153,579 + PS417_00735 0.39 +0.2 153,580 - PS417_00735 0.39 -0.4 153,580 - PS417_00735 0.39 +0.8 153,688 + PS417_00735 0.46 +0.8 153,827 - PS417_00735 0.56 -2.2
Or see this region's nucleotide sequence