Strain Fitness in Pseudomonas simiae WCS417 around PS417_07315

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,612,243	+				+1.3
1,612,244	-				-0.2
1,612,410	+		PS417_07310	0.17	-0.7
1,612,411	-		PS417_07310	0.17	+0.1
1,612,860	+		PS417_07310	0.69	-1.0
1,612,860	+		PS417_07310	0.69	-0.8
1,612,861	-		PS417_07310	0.69	-0.2
1,612,861	-		PS417_07310	0.69	+0.5
1,612,864	-		PS417_07310	0.69	-0.7
1,612,864	-		PS417_07310	0.69	-1.0
1,612,887	+		PS417_07310	0.72	-0.2
1,612,887	+		PS417_07310	0.72	+3.3
1,612,888	-		PS417_07310	0.72	+1.3
1,612,891	+		PS417_07310	0.72	-0.8
1,613,041	-		PS417_07310	0.90	-0.5
1,613,041	-		PS417_07310	0.90	-0.2
1,613,169	+				+0.9
1,613,169	+				-0.2
1,613,169	+				-0.6
1,613,170	-				-0.4
1,613,170	-				+0.0
1,613,209	+				-0.1
1,613,331	-				-0.7
1,613,341	+		PS417_07315	0.12	+1.0
1,613,533	-		PS417_07315	0.33	-0.3
1,613,625	+		PS417_07315	0.43	-1.2
1,613,816	-		PS417_07315	0.64	+1.5
1,613,884	-		PS417_07315	0.72	+0.5
1,613,957	-		PS417_07315	0.80	-0.6
1,613,972	-		PS417_07315	0.81	+0.8
1,613,972	-		PS417_07315	0.81	-0.2
1,614,034	+		PS417_07315	0.88	+0.8
1,614,034	+		PS417_07315	0.88	+0.0
1,614,140	-				-1.0
1,614,149	+				+0.3
1,614,150	-				-2.8
1,614,197	+				+0.2
1,614,197	+				-2.5
1,614,198	-				-0.1
1,614,204	+				+3.9
1,614,248	+				-0.3
1,614,248	+				-1.1
1,614,249	-				-0.7
1,614,261	+				+1.3
1,614,262	-				+0.3
1,614,304	-				-0.3
1,614,431	-				+0.3
1,614,461	+				+0.2
1,614,462	-				+1.3
1,614,462	-				-2.1
1,614,602	+		PS417_07325	0.16	-0.1
1,614,602	+		PS417_07325	0.16	+0.5
1,614,602	+		PS417_07325	0.16	+1.3
1,614,603	-		PS417_07325	0.16	-1.6
1,614,775	-		PS417_07325	0.36	-1.0
1,614,788	+		PS417_07325	0.37	+0.8
1,614,957	+				-0.2
1,614,958	-		PS417_07325	0.57	+0.4
1,615,051	+		PS417_07325	0.67	-0.6
1,615,052	-		PS417_07325	0.67	+0.6
1,615,052	-		PS417_07325	0.67	+0.3
1,615,052	-		PS417_07325	0.67	-1.6
1,615,052	-		PS417_07325	0.67	-0.2
1,615,056	-		PS417_07325	0.68	+0.7
1,615,056	-		PS417_07325	0.68	-0.1
1,615,090	+		PS417_07325	0.72	-1.0
1,615,091	-		PS417_07325	0.72	+0.5
1,615,091	-		PS417_07325	0.72	-0.4